Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 AC025279.2-201ENST00000569730 653 ntBASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 RN7SL560P-201ENST00000577943 264 ntBASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HDAC6Q9UBN7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC6Q9UBN7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC6Q9UBN7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC6Q9UBN7 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC6Q9UBN7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC6Q9UBN7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.27■□□□□ 0.36
HDAC6Q9UBN7 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC6Q9UBN7 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
HDAC6Q9UBN7 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC6Q9UBN7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.27■□□□□ 0.36
HDAC6Q9UBN7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.27■□□□□ 0.36
HDAC6Q9UBN7 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
HDAC6Q9UBN7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC6Q9UBN7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC6Q9UBN7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
HDAC6Q9UBN7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC6Q9UBN7 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC6Q9UBN7 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.27■□□□□ 0.36
HDAC6Q9UBN7 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HDAC6Q9UBN7 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.27■□□□□ 0.36
HDAC6Q9UBN7 PFN1P12-201ENST00000455938 534 ntBASIC17.27■□□□□ 0.36
HDAC6Q9UBN7 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC6Q9UBN7 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.27■□□□□ 0.36
HDAC6Q9UBN7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HDAC6Q9UBN7 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.27■□□□□ 0.36
HDAC6Q9UBN7 AC244093.1-201ENST00000610837 814 ntBASIC17.27■□□□□ 0.36
HDAC6Q9UBN7 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
HDAC6Q9UBN7 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
HDAC6Q9UBN7 AC023908.3-201ENST00000564211 3047 ntBASIC17.27■□□□□ 0.35
HDAC6Q9UBN7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
HDAC6Q9UBN7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HDAC6Q9UBN7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
HDAC6Q9UBN7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.27■□□□□ 0.35
HDAC6Q9UBN7 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.27■□□□□ 0.35
HDAC6Q9UBN7 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HDAC6Q9UBN7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
HDAC6Q9UBN7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
HDAC6Q9UBN7 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 AC099548.2-209ENST00000480264 625 ntBASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 DUX4L45-201ENST00000566406 1057 ntBASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 AP005019.2-201ENST00000615104 511 ntBASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC6Q9UBN7 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms