Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 FKBP9-212ENST00000490776 2699 ntTSL 2 BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 GPAA1P2-202ENST00000606848 1787 ntBASIC18.26■□□□□ 0.51
RTN4Q9NQC3 AC015909.5-201ENST00000624336 2266 ntBASIC18.26■□□□□ 0.51
RTN4Q9NQC3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 VENTXP1-201ENST00000569334 2716 ntBASIC18.26■□□□□ 0.51
RTN4Q9NQC3 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTN4Q9NQC3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 CYB5B-204ENST00000515314 1658 ntTSL 5 BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 PCGF3-213ENST00000620529 1899 ntBASIC18.25■□□□□ 0.51
RTN4Q9NQC3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 AC103996.2-201ENST00000556763 915 ntTSL 3 BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 MTDHP3-201ENST00000594186 672 ntBASIC18.25■□□□□ 0.51
RTN4Q9NQC3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 AC022726.2-201ENST00000634673 547 ntBASIC18.25■□□□□ 0.51
RTN4Q9NQC3 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC18.25■□□□□ 0.51
RTN4Q9NQC3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 FOSL1P1-201ENST00000511041 816 ntBASIC18.24■□□□□ 0.51
RTN4Q9NQC3 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 SART3-203ENST00000546611 1184 ntBASIC18.24■□□□□ 0.51
RTN4Q9NQC3 CYP2A7P1-201ENST00000595391 815 ntBASIC18.24■□□□□ 0.51
RTN4Q9NQC3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 PCDHB18P-202ENST00000526308 3197 ntBASIC18.24■□□□□ 0.51
RTN4Q9NQC3 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.24■□□□□ 0.51
RTN4Q9NQC3 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 MTHFR-210ENST00000641407 2387 ntBASIC18.24■□□□□ 0.51
RTN4Q9NQC3 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTN4Q9NQC3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms