Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 MIR6069-201ENST00000620069 79 ntBASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
HDHD3Q9BSH5 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 AL133267.1-201ENST00000398220 340 ntBASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 AC009093.7-201ENST00000623853 1223 ntBASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 AL033527.5-202ENST00000641632 1098 ntBASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HDHD3Q9BSH5 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 AC006504.5-208ENST00000588784 2401 ntBASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HDHD3Q9BSH5 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms