Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.48□□□□□ -0.09
TM9SF4Q92544 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.48□□□□□ -0.09
TM9SF4Q92544 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
TM9SF4Q92544 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF4Q92544 BNIP3P42-201ENST00000454982 569 ntBASIC14.48□□□□□ -0.09
TM9SF4Q92544 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.48□□□□□ -0.09
TM9SF4Q92544 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF4Q92544 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.48□□□□□ -0.09
TM9SF4Q92544 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.48□□□□□ -0.09
TM9SF4Q92544 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.48□□□□□ -0.09
TM9SF4Q92544 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.48□□□□□ -0.09
TM9SF4Q92544 AC120045.2-201ENST00000567334 178 ntBASIC14.48□□□□□ -0.09
TM9SF4Q92544 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.48□□□□□ -0.09
TM9SF4Q92544 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.48□□□□□ -0.09
TM9SF4Q92544 BNIP3P29-201ENST00000598302 571 ntBASIC14.48□□□□□ -0.09
TM9SF4Q92544 AL049840.4-201ENST00000602422 811 ntBASIC14.48□□□□□ -0.09
TM9SF4Q92544 AC011447.5-201ENST00000616168 564 ntBASIC14.48□□□□□ -0.09
TM9SF4Q92544 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.48□□□□□ -0.09
TM9SF4Q92544 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.48□□□□□ -0.09
TM9SF4Q92544 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF4Q92544 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF4Q92544 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TM9SF4Q92544 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.48□□□□□ -0.09
TM9SF4Q92544 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF4Q92544 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF4Q92544 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF4Q92544 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF4Q92544 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.48□□□□□ -0.09
TM9SF4Q92544 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF4Q92544 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.48□□□□□ -0.09
TM9SF4Q92544 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TM9SF4Q92544 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF4Q92544 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF4Q92544 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TM9SF4Q92544 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF4Q92544 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.47□□□□□ -0.09
TM9SF4Q92544 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF4Q92544 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF4Q92544 AC090616.6-203ENST00000579186 1945 ntBASIC14.47□□□□□ -0.09
TM9SF4Q92544 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF4Q92544 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TM9SF4Q92544 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF4Q92544 AC026748.1-201ENST00000624349 3251 ntBASIC14.47□□□□□ -0.09
TM9SF4Q92544 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TM9SF4Q92544 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.47□□□□□ -0.09
TM9SF4Q92544 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.47□□□□□ -0.09
TM9SF4Q92544 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF4Q92544 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.47□□□□□ -0.09
TM9SF4Q92544 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF4Q92544 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.47□□□□□ -0.09
TM9SF4Q92544 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.47□□□□□ -0.09
TM9SF4Q92544 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.47□□□□□ -0.09
TM9SF4Q92544 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF4Q92544 BCRP2-202ENST00000447763 634 ntBASIC14.47□□□□□ -0.09
TM9SF4Q92544 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.47□□□□□ -0.09
TM9SF4Q92544 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.47□□□□□ -0.09
TM9SF4Q92544 BCRP6-201ENST00000510112 632 ntBASIC14.47□□□□□ -0.09
TM9SF4Q92544 BCRP7-201ENST00000511549 544 ntBASIC14.47□□□□□ -0.09
TM9SF4Q92544 RNA5SP412-201ENST00000516234 123 ntBASIC14.47□□□□□ -0.09
TM9SF4Q92544 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.47□□□□□ -0.09
TM9SF4Q92544 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.47□□□□□ -0.09
TM9SF4Q92544 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.47□□□□□ -0.09
TM9SF4Q92544 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.47□□□□□ -0.09
TM9SF4Q92544 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.47□□□□□ -0.09
TM9SF4Q92544 AP001063.1-201ENST00000568332 529 ntBASIC14.47□□□□□ -0.09
TM9SF4Q92544 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TM9SF4Q92544 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF4Q92544 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
TM9SF4Q92544 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF4Q92544 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF4Q92544 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.47□□□□□ -0.09
TM9SF4Q92544 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.47□□□□□ -0.09
TM9SF4Q92544 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF4Q92544 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TM9SF4Q92544 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.47□□□□□ -0.09
TM9SF4Q92544 AC067930.6-201ENST00000623257 4947 ntBASIC14.47□□□□□ -0.09
TM9SF4Q92544 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF4Q92544 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF4Q92544 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF4Q92544 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.47□□□□□ -0.09
TM9SF4Q92544 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF4Q92544 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF4Q92544 AC105250.1-201ENST00000509378 2057 ntBASIC14.46□□□□□ -0.09
TM9SF4Q92544 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF4Q92544 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.46□□□□□ -0.09
TM9SF4Q92544 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.46□□□□□ -0.09
TM9SF4Q92544 REXO1L6P-201ENST00000603433 1515 ntBASIC14.46□□□□□ -0.09
TM9SF4Q92544 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF4Q92544 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF4Q92544 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF4Q92544 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF4Q92544 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF4Q92544 TUBB1P2-201ENST00000422712 1306 ntBASIC14.46□□□□□ -0.09
TM9SF4Q92544 TUBB1P1-201ENST00000503144 1300 ntBASIC14.46□□□□□ -0.09
TM9SF4Q92544 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.46□□□□□ -0.09
TM9SF4Q92544 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TM9SF4Q92544 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TM9SF4Q92544 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF4Q92544 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TM9SF4Q92544 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms