Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 SPDYE17-201ENST00000412399 783 ntBASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 AL080243.2-201ENST00000418783 582 ntBASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 AC092580.3-201ENST00000430932 139 ntBASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 HLA-V-204ENST00000476601 1289 ntBASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 TEX28P1-201ENST00000613479 1221 ntBASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 TEX28P2-201ENST00000617764 1221 ntBASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.58■□□□□ 0.08
CFAP61Q8NHU2 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 AC093214.1-201ENST00000511688 1107 ntBASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 AL158211.3-201ENST00000607385 239 ntBASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 MIR6069-201ENST00000620069 79 ntBASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 KRT8P44-201ENST00000441609 1350 ntBASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 C18orf15-201ENST00000623680 2534 ntBASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CFAP61Q8NHU2 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CFAP61Q8NHU2 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CFAP61Q8NHU2 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CFAP61Q8NHU2 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CFAP61Q8NHU2 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CFAP61Q8NHU2 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CFAP61Q8NHU2 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CFAP61Q8NHU2 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms