Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 AC015909.5-201ENST00000624336 2266 ntBASIC11.47□□□□□ -0.57
NUP35Q8NFH5 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NUP35Q8NFH5 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 KRT8P24-201ENST00000560290 1559 ntBASIC11.46□□□□□ -0.57
NUP35Q8NFH5 AC007787.1-201ENST00000588095 1583 ntBASIC11.46□□□□□ -0.57
NUP35Q8NFH5 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 ATP6V0CP3-201ENST00000417255 467 ntBASIC11.46□□□□□ -0.57
NUP35Q8NFH5 EEF1DP4-201ENST00000446006 880 ntBASIC11.46□□□□□ -0.57
NUP35Q8NFH5 AC108073.2-201ENST00000464002 357 ntBASIC11.46□□□□□ -0.57
NUP35Q8NFH5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 TMEM198B-204ENST00000484016 896 ntBASIC11.46□□□□□ -0.57
NUP35Q8NFH5 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 AL049597.2-201ENST00000565575 961 ntBASIC11.46□□□□□ -0.57
NUP35Q8NFH5 COQ9-214ENST00000567933 882 ntTSL 3 BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 PAM16-208ENST00000573553 722 ntTSL 2 BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 ARL16-209ENST00000573715 763 ntTSL 3 BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 ARL16-211ENST00000576135 694 ntTSL 3 BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NUP35Q8NFH5 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
NUP35Q8NFH5 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
NUP35Q8NFH5 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC11.46□□□□□ -0.58
NUP35Q8NFH5 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
NUP35Q8NFH5 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
NUP35Q8NFH5 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
NUP35Q8NFH5 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
NUP35Q8NFH5 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
NUP35Q8NFH5 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
NUP35Q8NFH5 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC11.46□□□□□ -0.58
NUP35Q8NFH5 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
NUP35Q8NFH5 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
NUP35Q8NFH5 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
NUP35Q8NFH5 INVS-201ENST00000262456 2968 ntTSL 5 BASIC11.46□□□□□ -0.58
NUP35Q8NFH5 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
NUP35Q8NFH5 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
NUP35Q8NFH5 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
NUP35Q8NFH5 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
NUP35Q8NFH5 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
NUP35Q8NFH5 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
NUP35Q8NFH5 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
NUP35Q8NFH5 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
NUP35Q8NFH5 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
NUP35Q8NFH5 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NUP35Q8NFH5 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC11.45□□□□□ -0.58
NUP35Q8NFH5 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
NUP35Q8NFH5 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NUP35Q8NFH5 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
NUP35Q8NFH5 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC11.45□□□□□ -0.58
NUP35Q8NFH5 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
NUP35Q8NFH5 KRT8P22-201ENST00000562317 1415 ntBASIC11.45□□□□□ -0.58
NUP35Q8NFH5 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
NUP35Q8NFH5 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms