Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 CRB3P1-201ENST00000449338 276 ntBASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 AC084364.1-201ENST00000551967 1556 ntBASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
C11orf42Q8N5U0 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 AC126335.2-201ENST00000623362 4637 ntBASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 AC087499.6-201ENST00000411576 835 ntBASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 TP53TG3HP-202ENST00000569755 579 ntBASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 AL662799.1-202ENST00000614205 422 ntBASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.79□□□□□ -0.36
C11orf42Q8N5U0 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.78□□□□□ -0.36
C11orf42Q8N5U0 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms