Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
KRT39Q6A163 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
KRT39Q6A163 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.48■□□□□ 0.23
KRT39Q6A163 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT39Q6A163 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT39Q6A163 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT39Q6A163 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.48■□□□□ 0.23
KRT39Q6A163 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT39Q6A163 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.48■□□□□ 0.23
KRT39Q6A163 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.48■□□□□ 0.23
KRT39Q6A163 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.48■□□□□ 0.23
KRT39Q6A163 AC114812.1-204ENST00000449669 728 ntBASIC16.48■□□□□ 0.23
KRT39Q6A163 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.48■□□□□ 0.23
KRT39Q6A163 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.48■□□□□ 0.23
KRT39Q6A163 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
KRT39Q6A163 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.48■□□□□ 0.23
KRT39Q6A163 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT39Q6A163 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
KRT39Q6A163 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.48■□□□□ 0.23
KRT39Q6A163 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
KRT39Q6A163 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.48■□□□□ 0.23
KRT39Q6A163 AL033527.5-201ENST00000641382 801 ntBASIC16.48■□□□□ 0.23
KRT39Q6A163 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT39Q6A163 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
KRT39Q6A163 CICP24-201ENST00000605464 2705 ntBASIC16.48■□□□□ 0.23
KRT39Q6A163 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
KRT39Q6A163 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.48■□□□□ 0.23
KRT39Q6A163 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT39Q6A163 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.48■□□□□ 0.23
KRT39Q6A163 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.48■□□□□ 0.23
KRT39Q6A163 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
KRT39Q6A163 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT39Q6A163 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT39Q6A163 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.48■□□□□ 0.23
KRT39Q6A163 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT39Q6A163 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT39Q6A163 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT39Q6A163 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
KRT39Q6A163 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT39Q6A163 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT39Q6A163 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT39Q6A163 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT39Q6A163 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT39Q6A163 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT39Q6A163 KRT8P14-201ENST00000414254 1442 ntBASIC16.47■□□□□ 0.23
KRT39Q6A163 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT39Q6A163 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT39Q6A163 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT39Q6A163 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT39Q6A163 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT39Q6A163 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT39Q6A163 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT39Q6A163 RNU1-114P-201ENST00000365297 166 ntBASIC16.47■□□□□ 0.23
KRT39Q6A163 ACKR1-201ENST00000368121 1240 ntBASIC16.47■□□□□ 0.23
KRT39Q6A163 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
KRT39Q6A163 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT39Q6A163 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.47■□□□□ 0.23
KRT39Q6A163 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
KRT39Q6A163 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT39Q6A163 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
KRT39Q6A163 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT39Q6A163 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT39Q6A163 CLUHP6-201ENST00000580789 941 ntBASIC16.47■□□□□ 0.23
KRT39Q6A163 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT39Q6A163 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT39Q6A163 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.47■□□□□ 0.23
KRT39Q6A163 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.47■□□□□ 0.23
KRT39Q6A163 AP005019.2-201ENST00000615104 511 ntBASIC16.47■□□□□ 0.23
KRT39Q6A163 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.47■□□□□ 0.23
KRT39Q6A163 CICP23-201ENST00000605013 2741 ntBASIC16.47■□□□□ 0.23
KRT39Q6A163 AL137783.1-201ENST00000623494 1896 ntBASIC16.47■□□□□ 0.23
KRT39Q6A163 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT39Q6A163 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT39Q6A163 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT39Q6A163 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT39Q6A163 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.47■□□□□ 0.23
KRT39Q6A163 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
KRT39Q6A163 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT39Q6A163 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT39Q6A163 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT39Q6A163 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.47■□□□□ 0.23
KRT39Q6A163 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.47■□□□□ 0.23
KRT39Q6A163 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT39Q6A163 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
KRT39Q6A163 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
KRT39Q6A163 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT39Q6A163 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT39Q6A163 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
KRT39Q6A163 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT39Q6A163 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.46■□□□□ 0.23
KRT39Q6A163 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT39Q6A163 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT39Q6A163 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT39Q6A163 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT39Q6A163 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT39Q6A163 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.46■□□□□ 0.23
KRT39Q6A163 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT39Q6A163 LINC02228-204ENST00000642115 2962 ntBASIC16.46■□□□□ 0.23
KRT39Q6A163 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT39Q6A163 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms