Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ALFQ53S48 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ALFQ53S48 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.69■□□□□ 0.1
ALFQ53S48 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
ALFQ53S48 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.69■□□□□ 0.1
ALFQ53S48 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
ALFQ53S48 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.69■□□□□ 0.1
ALFQ53S48 AL355864.2-201ENST00000447420 863 ntBASIC15.69■□□□□ 0.1
ALFQ53S48 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ALFQ53S48 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.69■□□□□ 0.1
ALFQ53S48 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ALFQ53S48 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.69■□□□□ 0.1
ALFQ53S48 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.69■□□□□ 0.1
ALFQ53S48 AC106886.1-201ENST00000568660 600 ntBASIC15.69■□□□□ 0.1
ALFQ53S48 AL022328.1-201ENST00000610050 478 ntBASIC15.69■□□□□ 0.1
ALFQ53S48 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.69■□□□□ 0.1
ALFQ53S48 AC145423.3-201ENST00000615987 467 ntBASIC15.69■□□□□ 0.1
ALFQ53S48 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ALFQ53S48 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ALFQ53S48 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ALFQ53S48 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ALFQ53S48 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
ALFQ53S48 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ALFQ53S48 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ALFQ53S48 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ALFQ53S48 AC023157.3-201ENST00000619086 2088 ntBASIC15.69■□□□□ 0.1
ALFQ53S48 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ALFQ53S48 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ALFQ53S48 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALFQ53S48 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
ALFQ53S48 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALFQ53S48 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALFQ53S48 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALFQ53S48 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
ALFQ53S48 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
ALFQ53S48 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.68■□□□□ 0.1
ALFQ53S48 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.68■□□□□ 0.1
ALFQ53S48 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.68■□□□□ 0.1
ALFQ53S48 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALFQ53S48 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ALFQ53S48 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALFQ53S48 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.68■□□□□ 0.1
ALFQ53S48 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ALFQ53S48 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALFQ53S48 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.68■□□□□ 0.1
ALFQ53S48 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALFQ53S48 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALFQ53S48 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALFQ53S48 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.68■□□□□ 0.1
ALFQ53S48 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALFQ53S48 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
ALFQ53S48 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALFQ53S48 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.68■□□□□ 0.1
ALFQ53S48 EIF3FP3-201ENST00000434851 1086 ntBASIC15.68■□□□□ 0.1
ALFQ53S48 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ALFQ53S48 FTH1P14-201ENST00000482930 551 ntBASIC15.68■□□□□ 0.1
ALFQ53S48 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.68■□□□□ 0.1
ALFQ53S48 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
ALFQ53S48 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.68■□□□□ 0.1
ALFQ53S48 AL512343.1-201ENST00000605837 169 ntBASIC15.68■□□□□ 0.1
ALFQ53S48 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.68■□□□□ 0.1
ALFQ53S48 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.68■□□□□ 0.1
ALFQ53S48 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.68■□□□□ 0.1
ALFQ53S48 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
ALFQ53S48 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.68■□□□□ 0.1
ALFQ53S48 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.68■□□□□ 0.1
ALFQ53S48 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALFQ53S48 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.68■□□□□ 0.1
ALFQ53S48 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALFQ53S48 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALFQ53S48 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALFQ53S48 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ALFQ53S48 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ALFQ53S48 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.68■□□□□ 0.1
ALFQ53S48 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.68■□□□□ 0.1
ALFQ53S48 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.68■□□□□ 0.1
ALFQ53S48 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ALFQ53S48 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.67■□□□□ 0.1
ALFQ53S48 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.67■□□□□ 0.1
ALFQ53S48 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ALFQ53S48 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ALFQ53S48 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ALFQ53S48 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
ALFQ53S48 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ALFQ53S48 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ALFQ53S48 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ALFQ53S48 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ALFQ53S48 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ALFQ53S48 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ALFQ53S48 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ALFQ53S48 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ALFQ53S48 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ALFQ53S48 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ALFQ53S48 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.67■□□□□ 0.1
ALFQ53S48 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ALFQ53S48 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ALFQ53S48 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ALFQ53S48 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.67■□□□□ 0.1
ALFQ53S48 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.67■□□□□ 0.1
ALFQ53S48 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms