Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
KHDC1Q4VXA5 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
KHDC1Q4VXA5 AC068587.6-202ENST00000641839 5619 ntBASIC15.52■□□□□ 0.08
KHDC1Q4VXA5 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
KHDC1Q4VXA5 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
KHDC1Q4VXA5 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
KHDC1Q4VXA5 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KHDC1Q4VXA5 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.52■□□□□ 0.08
KHDC1Q4VXA5 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
KHDC1Q4VXA5 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
KHDC1Q4VXA5 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
KHDC1Q4VXA5 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
KHDC1Q4VXA5 PIN1P1-201ENST00000412108 996 ntBASIC15.52■□□□□ 0.08
KHDC1Q4VXA5 AC098850.1-201ENST00000419919 790 ntBASIC15.52■□□□□ 0.08
KHDC1Q4VXA5 CRB3P1-201ENST00000449338 276 ntBASIC15.52■□□□□ 0.08
KHDC1Q4VXA5 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.52■□□□□ 0.08
KHDC1Q4VXA5 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.52■□□□□ 0.08
KHDC1Q4VXA5 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.52■□□□□ 0.08
KHDC1Q4VXA5 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
KHDC1Q4VXA5 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.52■□□□□ 0.08
KHDC1Q4VXA5 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.52■□□□□ 0.08
KHDC1Q4VXA5 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
KHDC1Q4VXA5 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.52■□□□□ 0.07
KHDC1Q4VXA5 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
KHDC1Q4VXA5 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
KHDC1Q4VXA5 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
KHDC1Q4VXA5 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
KHDC1Q4VXA5 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
KHDC1Q4VXA5 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
KHDC1Q4VXA5 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.52■□□□□ 0.07
KHDC1Q4VXA5 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.52■□□□□ 0.07
KHDC1Q4VXA5 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
KHDC1Q4VXA5 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
KHDC1Q4VXA5 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.52■□□□□ 0.07
KHDC1Q4VXA5 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
KHDC1Q4VXA5 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.52■□□□□ 0.07
KHDC1Q4VXA5 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.52■□□□□ 0.07
KHDC1Q4VXA5 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
KHDC1Q4VXA5 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
KHDC1Q4VXA5 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 AL035633.1-201ENST00000406139 838 ntBASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 DFFBP1-201ENST00000433250 979 ntBASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 AC093004.1-201ENST00000508850 424 ntBASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 SPDYE22P-201ENST00000582158 798 ntBASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 MIR8072-201ENST00000614241 80 ntBASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
KHDC1Q4VXA5 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.5■□□□□ 0.07
KHDC1Q4VXA5 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KHDC1Q4VXA5 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KHDC1Q4VXA5 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
KHDC1Q4VXA5 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KHDC1Q4VXA5 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.5■□□□□ 0.07
KHDC1Q4VXA5 AC148477.4-201ENST00000613430 1793 ntBASIC15.5■□□□□ 0.07
KHDC1Q4VXA5 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
KHDC1Q4VXA5 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
KHDC1Q4VXA5 AL121723.1-201ENST00000445194 1519 ntBASIC15.5■□□□□ 0.07
KHDC1Q4VXA5 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
KHDC1Q4VXA5 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KHDC1Q4VXA5 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KHDC1Q4VXA5 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KHDC1Q4VXA5 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
KHDC1Q4VXA5 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.5■□□□□ 0.07
KHDC1Q4VXA5 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.5■□□□□ 0.07
KHDC1Q4VXA5 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
KHDC1Q4VXA5 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.5■□□□□ 0.07
KHDC1Q4VXA5 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
KHDC1Q4VXA5 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.5■□□□□ 0.07
KHDC1Q4VXA5 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms