Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 AP001063.1-201ENST00000568332 529 ntBASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 AP005019.2-201ENST00000615104 511 ntBASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 NORAD-201ENST00000565493 5339 ntBASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
PTPN20Q4JDL3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 NFIC-211ENST00000641145 8399 ntBASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 AP006294.1-201ENST00000415407 339 ntBASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 AC093433.1-201ENST00000458048 571 ntBASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 AP005018.1-201ENST00000525475 301 ntBASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 DUX4L47-201ENST00000566374 394 ntBASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 AC023090.2-201ENST00000625182 2110 ntBASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN20Q4JDL3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 ACKR1-201ENST00000368121 1240 ntBASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 EIF3FP3-201ENST00000434851 1086 ntBASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 AC114812.1-204ENST00000449669 728 ntBASIC16.02■□□□□ 0.16
PTPN20Q4JDL3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms