Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.15■□□□□ 0.02
ZNF140P52738 AC010319.3-201ENST00000597028 470 ntBASIC15.15■□□□□ 0.02
ZNF140P52738 AL603764.1-201ENST00000636452 321 ntBASIC15.15■□□□□ 0.02
ZNF140P52738 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF140P52738 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF140P52738 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF140P52738 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF140P52738 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF140P52738 AL390755.1-201ENST00000623716 2027 ntBASIC15.15■□□□□ 0.02
ZNF140P52738 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ZNF140P52738 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF140P52738 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF140P52738 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF140P52738 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
ZNF140P52738 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.15■□□□□ 0.02
ZNF140P52738 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF140P52738 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.15■□□□□ 0.02
ZNF140P52738 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF140P52738 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF140P52738 AC018442.1-201ENST00000421439 2061 ntBASIC15.15■□□□□ 0.02
ZNF140P52738 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF140P52738 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF140P52738 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF140P52738 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF140P52738 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF140P52738 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF140P52738 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF140P52738 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF140P52738 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF140P52738 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF140P52738 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF140P52738 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
ZNF140P52738 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF140P52738 AC055811.4-201ENST00000624039 1754 ntBASIC15.14■□□□□ 0.01
ZNF140P52738 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.14■□□□□ 0.01
ZNF140P52738 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF140P52738 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
ZNF140P52738 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF140P52738 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.14■□□□□ 0.01
ZNF140P52738 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.14■□□□□ 0.01
ZNF140P52738 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
ZNF140P52738 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF140P52738 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ZNF140P52738 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF140P52738 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF140P52738 AC012441.1-201ENST00000446669 685 ntBASIC15.14■□□□□ 0.01
ZNF140P52738 RN7SL837P-201ENST00000463010 287 ntBASIC15.14■□□□□ 0.01
ZNF140P52738 RN7SL752P-201ENST00000463779 287 ntBASIC15.14■□□□□ 0.01
ZNF140P52738 AP005018.1-201ENST00000525475 301 ntBASIC15.14■□□□□ 0.01
ZNF140P52738 AL596325.1-201ENST00000563991 1082 ntBASIC15.14■□□□□ 0.01
ZNF140P52738 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF140P52738 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF140P52738 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF140P52738 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.14■□□□□ 0.01
ZNF140P52738 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.14■□□□□ 0.01
ZNF140P52738 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF140P52738 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF140P52738 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
ZNF140P52738 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ZNF140P52738 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF140P52738 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF140P52738 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
ZNF140P52738 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF140P52738 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF140P52738 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF140P52738 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ZNF140P52738 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ZNF140P52738 LRRC59-203ENST00000576448 1531 ntBASIC15.13■□□□□ 0.01
ZNF140P52738 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ZNF140P52738 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
ZNF140P52738 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.13■□□□□ 0.01
ZNF140P52738 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.13■□□□□ 0.01
ZNF140P52738 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF140P52738 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF140P52738 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ZNF140P52738 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.13■□□□□ 0.01
ZNF140P52738 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF140P52738 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.13■□□□□ 0.01
ZNF140P52738 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF140P52738 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.13■□□□□ 0.01
ZNF140P52738 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.13■□□□□ 0.01
ZNF140P52738 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF140P52738 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.13■□□□□ 0.01
ZNF140P52738 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF140P52738 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms