Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CDK7P50613 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK7P50613 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDK7P50613 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK7P50613 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDK7P50613 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CDK7P50613 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDK7P50613 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.79■□□□□ 0.28
CDK7P50613 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDK7P50613 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK7P50613 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDK7P50613 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
CDK7P50613 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDK7P50613 AC092364.2-201ENST00000596710 2692 ntBASIC16.78■□□□□ 0.28
CDK7P50613 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.78■□□□□ 0.28
CDK7P50613 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK7P50613 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK7P50613 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK7P50613 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDK7P50613 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDK7P50613 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.78■□□□□ 0.28
CDK7P50613 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK7P50613 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK7P50613 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
CDK7P50613 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.78■□□□□ 0.28
CDK7P50613 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.78■□□□□ 0.28
CDK7P50613 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK7P50613 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK7P50613 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDK7P50613 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDK7P50613 AC069218.1-201ENST00000435269 762 ntBASIC16.78■□□□□ 0.28
CDK7P50613 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.78■□□□□ 0.28
CDK7P50613 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.78■□□□□ 0.28
CDK7P50613 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.78■□□□□ 0.28
CDK7P50613 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.78■□□□□ 0.28
CDK7P50613 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDK7P50613 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CDK7P50613 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK7P50613 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDK7P50613 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDK7P50613 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.78■□□□□ 0.28
CDK7P50613 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK7P50613 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.78■□□□□ 0.28
CDK7P50613 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
CDK7P50613 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK7P50613 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.78■□□□□ 0.28
CDK7P50613 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.78■□□□□ 0.28
CDK7P50613 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
CDK7P50613 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK7P50613 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK7P50613 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK7P50613 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
CDK7P50613 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.77■□□□□ 0.28
CDK7P50613 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CDK7P50613 AC079328.2-201ENST00000561241 3354 ntBASIC16.77■□□□□ 0.28
CDK7P50613 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK7P50613 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK7P50613 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK7P50613 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDK7P50613 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK7P50613 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.77■□□□□ 0.28
CDK7P50613 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CDK7P50613 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDK7P50613 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
CDK7P50613 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK7P50613 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDK7P50613 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK7P50613 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CDK7P50613 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDK7P50613 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK7P50613 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDK7P50613 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.77■□□□□ 0.28
CDK7P50613 PUDPP3-201ENST00000445368 636 ntBASIC16.77■□□□□ 0.28
CDK7P50613 AC234782.1-201ENST00000451950 919 ntBASIC16.77■□□□□ 0.28
CDK7P50613 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.77■□□□□ 0.28
CDK7P50613 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.77■□□□□ 0.28
CDK7P50613 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.77■□□□□ 0.28
CDK7P50613 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.77■□□□□ 0.28
CDK7P50613 MIR3147-201ENST00000577811 66 ntBASIC16.77■□□□□ 0.28
CDK7P50613 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.77■□□□□ 0.28
CDK7P50613 AL353770.1-201ENST00000614915 403 ntBASIC16.77■□□□□ 0.28
CDK7P50613 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK7P50613 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CDK7P50613 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK7P50613 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK7P50613 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK7P50613 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.77■□□□□ 0.27
CDK7P50613 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CDK7P50613 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDK7P50613 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.77■□□□□ 0.27
CDK7P50613 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK7P50613 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
CDK7P50613 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDK7P50613 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.27
CDK7P50613 AC055811.4-201ENST00000624039 1754 ntBASIC16.77■□□□□ 0.27
CDK7P50613 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CDK7P50613 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK7P50613 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK7P50613 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK7P50613 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms