Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HTR3AP46098 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HTR3AP46098 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.19□□□□□ -0.14
HTR3AP46098 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HTR3AP46098 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.18□□□□□ -0.14
HTR3AP46098 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.18□□□□□ -0.14
HTR3AP46098 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HTR3AP46098 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HTR3AP46098 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.18□□□□□ -0.14
HTR3AP46098 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HTR3AP46098 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HTR3AP46098 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HTR3AP46098 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HTR3AP46098 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HTR3AP46098 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HTR3AP46098 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
HTR3AP46098 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HTR3AP46098 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HTR3AP46098 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
HTR3AP46098 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.18□□□□□ -0.14
HTR3AP46098 AC004890.2-204ENST00000481968 304 ntBASIC14.18□□□□□ -0.14
HTR3AP46098 AC093214.1-201ENST00000511688 1107 ntBASIC14.18□□□□□ -0.14
HTR3AP46098 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.18□□□□□ -0.14
HTR3AP46098 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.18□□□□□ -0.14
HTR3AP46098 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.18□□□□□ -0.14
HTR3AP46098 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.18□□□□□ -0.14
HTR3AP46098 AF228730.6-201ENST00000641497 218 ntBASIC14.18□□□□□ -0.14
HTR3AP46098 AC084121.3-201ENST00000641716 218 ntBASIC14.18□□□□□ -0.14
HTR3AP46098 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.18□□□□□ -0.14
HTR3AP46098 AC126365.1-201ENST00000578585 1514 ntBASIC14.18□□□□□ -0.14
HTR3AP46098 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HTR3AP46098 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HTR3AP46098 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HTR3AP46098 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HTR3AP46098 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.18□□□□□ -0.14
HTR3AP46098 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HTR3AP46098 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.18□□□□□ -0.14
HTR3AP46098 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HTR3AP46098 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HTR3AP46098 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.18□□□□□ -0.14
HTR3AP46098 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.18□□□□□ -0.14
HTR3AP46098 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HTR3AP46098 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.18□□□□□ -0.14
HTR3AP46098 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.18□□□□□ -0.14
HTR3AP46098 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HTR3AP46098 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.18□□□□□ -0.14
HTR3AP46098 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.17□□□□□ -0.14
HTR3AP46098 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HTR3AP46098 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.17□□□□□ -0.14
HTR3AP46098 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HTR3AP46098 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HTR3AP46098 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
HTR3AP46098 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HTR3AP46098 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HTR3AP46098 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HTR3AP46098 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HTR3AP46098 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HTR3AP46098 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
HTR3AP46098 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HTR3AP46098 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.17□□□□□ -0.14
HTR3AP46098 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HTR3AP46098 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.17□□□□□ -0.14
HTR3AP46098 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.17□□□□□ -0.14
HTR3AP46098 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.17□□□□□ -0.14
HTR3AP46098 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.17□□□□□ -0.14
HTR3AP46098 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.17□□□□□ -0.14
HTR3AP46098 CYMP-203ENST00000474680 1263 ntBASIC14.17□□□□□ -0.14
HTR3AP46098 MEIS3P1-201ENST00000495167 958 ntBASIC14.17□□□□□ -0.14
HTR3AP46098 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.17□□□□□ -0.14
HTR3AP46098 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HTR3AP46098 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HTR3AP46098 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.17□□□□□ -0.14
HTR3AP46098 AC004461.2-201ENST00000629517 803 ntBASIC14.17□□□□□ -0.14
HTR3AP46098 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HTR3AP46098 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
HTR3AP46098 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HTR3AP46098 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HTR3AP46098 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.17□□□□□ -0.14
HTR3AP46098 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HTR3AP46098 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HTR3AP46098 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HTR3AP46098 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HTR3AP46098 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HTR3AP46098 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HTR3AP46098 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HTR3AP46098 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
HTR3AP46098 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HTR3AP46098 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HTR3AP46098 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HTR3AP46098 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HTR3AP46098 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HTR3AP46098 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HTR3AP46098 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.16□□□□□ -0.14
HTR3AP46098 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
HTR3AP46098 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
HTR3AP46098 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HTR3AP46098 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HTR3AP46098 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.16□□□□□ -0.14
HTR3AP46098 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HTR3AP46098 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms