Protein–RNA interactions for Protein: P20827

EFNA1, Ephrin-A1, humanhuman

Predicted RBP Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1P20827 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA1P20827 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA1P20827 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
EFNA1P20827 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA1P20827 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.63□□□□□ -0.07
EFNA1P20827 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.63□□□□□ -0.07
EFNA1P20827 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.63□□□□□ -0.07
EFNA1P20827 AC097493.3-201ENST00000509725 367 ntBASIC14.63□□□□□ -0.07
EFNA1P20827 IGHV3-42-201ENST00000520410 361 ntBASIC14.63□□□□□ -0.07
EFNA1P20827 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.63□□□□□ -0.07
EFNA1P20827 DUX4L27-201ENST00000554796 1261 ntBASIC14.63□□□□□ -0.07
EFNA1P20827 AC140878.1-201ENST00000565277 250 ntBASIC14.63□□□□□ -0.07
EFNA1P20827 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.63□□□□□ -0.07
EFNA1P20827 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.63□□□□□ -0.07
EFNA1P20827 AL844908.2-201ENST00000609461 460 ntBASIC14.63□□□□□ -0.07
EFNA1P20827 AC074044.1-201ENST00000609673 707 ntBASIC14.63□□□□□ -0.07
EFNA1P20827 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
EFNA1P20827 AC079781.4-201ENST00000641908 219 ntBASIC14.63□□□□□ -0.07
EFNA1P20827 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA1P20827 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.63□□□□□ -0.07
EFNA1P20827 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA1P20827 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA1P20827 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA1P20827 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA1P20827 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.63□□□□□ -0.07
EFNA1P20827 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA1P20827 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA1P20827 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA1P20827 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA1P20827 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.63□□□□□ -0.07
EFNA1P20827 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA1P20827 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.63□□□□□ -0.07
EFNA1P20827 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA1P20827 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA1P20827 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA1P20827 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
EFNA1P20827 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.63□□□□□ -0.07
EFNA1P20827 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.63□□□□□ -0.07
EFNA1P20827 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
EFNA1P20827 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.62□□□□□ -0.07
EFNA1P20827 SBF1P1-201ENST00000444527 5631 ntBASIC14.62□□□□□ -0.07
EFNA1P20827 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
EFNA1P20827 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
EFNA1P20827 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
EFNA1P20827 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
EFNA1P20827 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
EFNA1P20827 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.62□□□□□ -0.07
EFNA1P20827 WASH3P-207ENST00000560956 1394 ntBASIC14.62□□□□□ -0.07
EFNA1P20827 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
EFNA1P20827 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.62□□□□□ -0.07
EFNA1P20827 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
EFNA1P20827 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
EFNA1P20827 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
EFNA1P20827 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
EFNA1P20827 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
EFNA1P20827 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
EFNA1P20827 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
EFNA1P20827 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
EFNA1P20827 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
EFNA1P20827 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
EFNA1P20827 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
EFNA1P20827 MIR943-201ENST00000401286 94 ntBASIC14.62□□□□□ -0.07
EFNA1P20827 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.62□□□□□ -0.07
EFNA1P20827 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.62□□□□□ -0.07
EFNA1P20827 METTL21AP1-201ENST00000438852 635 ntBASIC14.62□□□□□ -0.07
EFNA1P20827 FAM86GP-201ENST00000448322 971 ntBASIC14.62□□□□□ -0.07
EFNA1P20827 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
EFNA1P20827 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.62□□□□□ -0.07
EFNA1P20827 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
EFNA1P20827 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.62□□□□□ -0.07
EFNA1P20827 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.62□□□□□ -0.07
EFNA1P20827 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.62□□□□□ -0.07
EFNA1P20827 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.62□□□□□ -0.07
EFNA1P20827 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.62□□□□□ -0.07
EFNA1P20827 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
EFNA1P20827 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
EFNA1P20827 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
EFNA1P20827 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
EFNA1P20827 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
EFNA1P20827 REXO1L4P-201ENST00000605109 1937 ntBASIC14.62□□□□□ -0.07
EFNA1P20827 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.62□□□□□ -0.07
EFNA1P20827 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
EFNA1P20827 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
EFNA1P20827 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.62□□□□□ -0.07
EFNA1P20827 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
EFNA1P20827 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.62□□□□□ -0.07
EFNA1P20827 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.62□□□□□ -0.07
EFNA1P20827 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
EFNA1P20827 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.62□□□□□ -0.07
EFNA1P20827 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
EFNA1P20827 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
EFNA1P20827 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.61□□□□□ -0.07
EFNA1P20827 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.61□□□□□ -0.07
EFNA1P20827 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EFNA1P20827 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
EFNA1P20827 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
EFNA1P20827 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
EFNA1P20827 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
EFNA1P20827 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
EFNA1P20827 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms