Protein–RNA interactions for Protein: P20749

BCL3, B-cell lymphoma 3 protein, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL3P20749 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.04□□□□□ -0.32
BCL3P20749 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BCL3P20749 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BCL3P20749 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BCL3P20749 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
BCL3P20749 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BCL3P20749 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
BCL3P20749 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
BCL3P20749 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
BCL3P20749 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BCL3P20749 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
BCL3P20749 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BCL3P20749 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BCL3P20749 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
BCL3P20749 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
BCL3P20749 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.03□□□□□ -0.32
BCL3P20749 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
BCL3P20749 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
BCL3P20749 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
BCL3P20749 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.03□□□□□ -0.32
BCL3P20749 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
BCL3P20749 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
BCL3P20749 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.03□□□□□ -0.32
BCL3P20749 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.03□□□□□ -0.32
BCL3P20749 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
BCL3P20749 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.03□□□□□ -0.32
BCL3P20749 AL589987.1-201ENST00000453380 819 ntBASIC13.03□□□□□ -0.32
BCL3P20749 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.03□□□□□ -0.32
BCL3P20749 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.03□□□□□ -0.32
BCL3P20749 AC135586.1-201ENST00000539323 574 ntBASIC13.03□□□□□ -0.32
BCL3P20749 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.03□□□□□ -0.32
BCL3P20749 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
BCL3P20749 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
BCL3P20749 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.03□□□□□ -0.32
BCL3P20749 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
BCL3P20749 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
BCL3P20749 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.03□□□□□ -0.32
BCL3P20749 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BCL3P20749 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
BCL3P20749 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.03□□□□□ -0.32
BCL3P20749 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.03□□□□□ -0.32
BCL3P20749 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BCL3P20749 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
BCL3P20749 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.03□□□□□ -0.32
BCL3P20749 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
BCL3P20749 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.03□□□□□ -0.32
BCL3P20749 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
BCL3P20749 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
BCL3P20749 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.03□□□□□ -0.32
BCL3P20749 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BCL3P20749 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
BCL3P20749 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.03□□□□□ -0.32
BCL3P20749 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
BCL3P20749 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
BCL3P20749 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BCL3P20749 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
BCL3P20749 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.03□□□□□ -0.32
BCL3P20749 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
BCL3P20749 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.03□□□□□ -0.32
BCL3P20749 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
BCL3P20749 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.02□□□□□ -0.32
BCL3P20749 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.02□□□□□ -0.32
BCL3P20749 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
BCL3P20749 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
BCL3P20749 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
BCL3P20749 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
BCL3P20749 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
BCL3P20749 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
BCL3P20749 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
BCL3P20749 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.32
BCL3P20749 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.02□□□□□ -0.32
BCL3P20749 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
BCL3P20749 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
BCL3P20749 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
BCL3P20749 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
BCL3P20749 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
BCL3P20749 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
BCL3P20749 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
BCL3P20749 INTS4P1-203ENST00000641008 3683 ntBASIC13.02□□□□□ -0.33
BCL3P20749 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.02□□□□□ -0.33
BCL3P20749 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
BCL3P20749 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
BCL3P20749 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
BCL3P20749 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
BCL3P20749 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
BCL3P20749 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.02□□□□□ -0.33
BCL3P20749 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.02□□□□□ -0.33
BCL3P20749 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
BCL3P20749 AC055876.3-201ENST00000431496 288 ntBASIC13.02□□□□□ -0.33
BCL3P20749 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
BCL3P20749 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
BCL3P20749 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.02□□□□□ -0.33
BCL3P20749 SAMD11P1-201ENST00000571429 661 ntBASIC13.02□□□□□ -0.33
BCL3P20749 AC008738.7-201ENST00000609744 511 ntBASIC13.02□□□□□ -0.33
BCL3P20749 AC138649.4-201ENST00000612222 287 ntBASIC13.02□□□□□ -0.33
BCL3P20749 AC093512.1-201ENST00000617969 520 ntBASIC13.02□□□□□ -0.33
BCL3P20749 AC004840.1-201ENST00000636359 365 ntBASIC13.02□□□□□ -0.33
BCL3P20749 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.02□□□□□ -0.33
BCL3P20749 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.02□□□□□ -0.33
BCL3P20749 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms