Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.95□□□□□ -0.02
CDH1P12830 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.95□□□□□ -0.02
CDH1P12830 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.95□□□□□ -0.02
CDH1P12830 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.95□□□□□ -0.02
CDH1P12830 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH1P12830 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.95□□□□□ -0.02
CDH1P12830 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.95□□□□□ -0.02
CDH1P12830 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CDH1P12830 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH1P12830 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH1P12830 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CDH1P12830 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH1P12830 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH1P12830 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
CDH1P12830 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH1P12830 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CDH1P12830 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH1P12830 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH1P12830 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH1P12830 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH1P12830 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH1P12830 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH1P12830 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH1P12830 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
CDH1P12830 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CDH1P12830 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH1P12830 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CDH1P12830 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH1P12830 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH1P12830 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH1P12830 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH1P12830 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH1P12830 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH1P12830 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH1P12830 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH1P12830 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH1P12830 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH1P12830 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH1P12830 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH1P12830 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.94□□□□□ -0.02
CDH1P12830 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CDH1P12830 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.94□□□□□ -0.02
CDH1P12830 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.94□□□□□ -0.02
CDH1P12830 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH1P12830 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH1P12830 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH1P12830 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH1P12830 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH1P12830 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH1P12830 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH1P12830 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH1P12830 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH1P12830 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH1P12830 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH1P12830 MIR600HG-201ENST00000449175 5984 ntBASIC14.94□□□□□ -0.02
CDH1P12830 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CDH1P12830 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH1P12830 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH1P12830 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CDH1P12830 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH1P12830 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH1P12830 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH1P12830 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CDH1P12830 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH1P12830 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH1P12830 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH1P12830 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH1P12830 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH1P12830 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH1P12830 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH1P12830 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH1P12830 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH1P12830 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH1P12830 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.93□□□□□ -0.02
CDH1P12830 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
CDH1P12830 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.93□□□□□ -0.02
CDH1P12830 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH1P12830 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CDH1P12830 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.93□□□□□ -0.02
CDH1P12830 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH1P12830 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH1P12830 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH1P12830 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH1P12830 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.93□□□□□ -0.02
CDH1P12830 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CDH1P12830 DFFBP1-201ENST00000433250 979 ntBASIC14.93□□□□□ -0.02
CDH1P12830 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CDH1P12830 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH1P12830 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH1P12830 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.93□□□□□ -0.02
CDH1P12830 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH1P12830 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.93□□□□□ -0.02
CDH1P12830 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
CDH1P12830 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CDH1P12830 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH1P12830 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH1P12830 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH1P12830 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH1P12830 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CDH1P12830 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms