Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.13□□□□□ -0.15
BMP4P12644 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.13□□□□□ -0.15
BMP4P12644 AC138649.4-201ENST00000612222 287 ntBASIC14.13□□□□□ -0.15
BMP4P12644 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.13□□□□□ -0.15
BMP4P12644 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.13□□□□□ -0.15
BMP4P12644 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
BMP4P12644 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BMP4P12644 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
BMP4P12644 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BMP4P12644 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.13□□□□□ -0.15
BMP4P12644 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.13□□□□□ -0.15
BMP4P12644 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
BMP4P12644 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
BMP4P12644 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
BMP4P12644 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BMP4P12644 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
BMP4P12644 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
BMP4P12644 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.13□□□□□ -0.15
BMP4P12644 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BMP4P12644 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
BMP4P12644 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BMP4P12644 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BMP4P12644 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
BMP4P12644 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
BMP4P12644 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
BMP4P12644 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
BMP4P12644 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BMP4P12644 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.12□□□□□ -0.15
BMP4P12644 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
BMP4P12644 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
BMP4P12644 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
BMP4P12644 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.12□□□□□ -0.15
BMP4P12644 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BMP4P12644 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
BMP4P12644 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
BMP4P12644 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.12□□□□□ -0.15
BMP4P12644 BCRP1-201ENST00000444246 691 ntBASIC14.12□□□□□ -0.15
BMP4P12644 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.12□□□□□ -0.15
BMP4P12644 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC14.12□□□□□ -0.15
BMP4P12644 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.12□□□□□ -0.15
BMP4P12644 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BMP4P12644 DUX4L27-201ENST00000554796 1261 ntBASIC14.12□□□□□ -0.15
BMP4P12644 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
BMP4P12644 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.12□□□□□ -0.15
BMP4P12644 AL158211.3-201ENST00000607385 239 ntBASIC14.12□□□□□ -0.15
BMP4P12644 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BMP4P12644 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
BMP4P12644 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BMP4P12644 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
BMP4P12644 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
BMP4P12644 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BMP4P12644 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.12□□□□□ -0.15
BMP4P12644 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BMP4P12644 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BMP4P12644 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.12□□□□□ -0.15
BMP4P12644 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BMP4P12644 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.12□□□□□ -0.15
BMP4P12644 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.12□□□□□ -0.15
BMP4P12644 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
BMP4P12644 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
BMP4P12644 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.12□□□□□ -0.15
BMP4P12644 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
BMP4P12644 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.12□□□□□ -0.15
BMP4P12644 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
BMP4P12644 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.11□□□□□ -0.15
BMP4P12644 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.11□□□□□ -0.15
BMP4P12644 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BMP4P12644 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.11□□□□□ -0.15
BMP4P12644 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BMP4P12644 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
BMP4P12644 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BMP4P12644 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
BMP4P12644 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BMP4P12644 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.11□□□□□ -0.15
BMP4P12644 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
BMP4P12644 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BMP4P12644 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BMP4P12644 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
BMP4P12644 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BMP4P12644 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
BMP4P12644 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BMP4P12644 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.11□□□□□ -0.15
BMP4P12644 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
BMP4P12644 HLA-H-201ENST00000383620 1096 ntBASIC14.11□□□□□ -0.15
BMP4P12644 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BMP4P12644 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BMP4P12644 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BMP4P12644 AL353705.2-201ENST00000428243 662 ntBASIC14.11□□□□□ -0.15
BMP4P12644 GPS2P2-201ENST00000430745 888 ntBASIC14.11□□□□□ -0.15
BMP4P12644 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BMP4P12644 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.11□□□□□ -0.15
BMP4P12644 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
BMP4P12644 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
BMP4P12644 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.11□□□□□ -0.15
BMP4P12644 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BMP4P12644 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
BMP4P12644 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.11□□□□□ -0.15
BMP4P12644 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BMP4P12644 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.11□□□□□ -0.15
BMP4P12644 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms