Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TPM2P07951 MST1P2-201ENST00000457982 2291 ntBASIC17.5■□□□□ 0.39
TPM2P07951 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TPM2P07951 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TPM2P07951 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPM2P07951 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TPM2P07951 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TPM2P07951 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TPM2P07951 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TPM2P07951 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TPM2P07951 IL9RP2-201ENST00000423948 1312 ntBASIC17.49■□□□□ 0.39
TPM2P07951 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TPM2P07951 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM2P07951 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TPM2P07951 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM2P07951 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
TPM2P07951 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TPM2P07951 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM2P07951 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC17.49■□□□□ 0.39
TPM2P07951 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TPM2P07951 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TPM2P07951 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.49■□□□□ 0.39
TPM2P07951 TFAMP1-201ENST00000412727 736 ntBASIC17.49■□□□□ 0.39
TPM2P07951 MED15P5-201ENST00000423150 992 ntBASIC17.49■□□□□ 0.39
TPM2P07951 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.49■□□□□ 0.39
TPM2P07951 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.49■□□□□ 0.39
TPM2P07951 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM2P07951 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.49■□□□□ 0.39
TPM2P07951 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TPM2P07951 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM2P07951 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM2P07951 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM2P07951 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC17.49■□□□□ 0.39
TPM2P07951 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.49■□□□□ 0.39
TPM2P07951 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC17.49■□□□□ 0.39
TPM2P07951 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM2P07951 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC17.49■□□□□ 0.39
TPM2P07951 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM2P07951 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.49■□□□□ 0.39
TPM2P07951 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM2P07951 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TPM2P07951 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.49■□□□□ 0.39
TPM2P07951 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM2P07951 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TPM2P07951 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM2P07951 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM2P07951 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TPM2P07951 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM2P07951 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM2P07951 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
TPM2P07951 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TPM2P07951 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TPM2P07951 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TPM2P07951 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TPM2P07951 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TPM2P07951 AL355306.1-201ENST00000415580 579 ntBASIC17.48■□□□□ 0.39
TPM2P07951 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.48■□□□□ 0.39
TPM2P07951 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.48■□□□□ 0.39
TPM2P07951 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.48■□□□□ 0.39
TPM2P07951 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.48■□□□□ 0.39
TPM2P07951 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.48■□□□□ 0.39
TPM2P07951 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.48■□□□□ 0.39
TPM2P07951 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.48■□□□□ 0.39
TPM2P07951 AC026979.3-201ENST00000607315 403 ntBASIC17.48■□□□□ 0.39
TPM2P07951 AC027601.4-201ENST00000611259 610 ntBASIC17.48■□□□□ 0.39
TPM2P07951 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM2P07951 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TPM2P07951 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TPM2P07951 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM2P07951 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TPM2P07951 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TPM2P07951 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TPM2P07951 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.48■□□□□ 0.39
TPM2P07951 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TPM2P07951 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC17.47■□□□□ 0.39
TPM2P07951 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TPM2P07951 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TPM2P07951 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM2P07951 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM2P07951 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM2P07951 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
TPM2P07951 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM2P07951 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TPM2P07951 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM2P07951 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM2P07951 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.47■□□□□ 0.39
TPM2P07951 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM2P07951 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM2P07951 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM2P07951 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.47■□□□□ 0.39
TPM2P07951 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.47■□□□□ 0.39
TPM2P07951 AL590627.1-203ENST00000421194 1026 ntBASIC17.47■□□□□ 0.39
TPM2P07951 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TPM2P07951 KRT18P3-201ENST00000451602 1288 ntBASIC17.47■□□□□ 0.39
TPM2P07951 AL139010.1-201ENST00000454878 894 ntBASIC17.47■□□□□ 0.39
TPM2P07951 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.47■□□□□ 0.39
TPM2P07951 AL450472.2-201ENST00000603663 1156 ntBASIC17.47■□□□□ 0.39
TPM2P07951 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TPM2P07951 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TPM2P07951 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms