Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HCN1O60741 AC023310.3-201ENST00000557027 670 ntBASIC14.37□□□□□ -0.11
HCN1O60741 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HCN1O60741 AC100756.1-201ENST00000562736 682 ntBASIC14.37□□□□□ -0.11
HCN1O60741 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
HCN1O60741 AC138749.3-201ENST00000567691 622 ntBASIC14.37□□□□□ -0.11
HCN1O60741 CHCHD2P3-201ENST00000603038 451 ntBASIC14.37□□□□□ -0.11
HCN1O60741 AC093726.1-201ENST00000608064 963 ntBASIC14.37□□□□□ -0.11
HCN1O60741 AC116165.1-201ENST00000611806 668 ntBASIC14.37□□□□□ -0.11
HCN1O60741 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN1O60741 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HCN1O60741 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.37□□□□□ -0.11
HCN1O60741 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.37□□□□□ -0.11
HCN1O60741 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN1O60741 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
HCN1O60741 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.37□□□□□ -0.11
HCN1O60741 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN1O60741 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HCN1O60741 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN1O60741 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN1O60741 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN1O60741 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN1O60741 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN1O60741 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HCN1O60741 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN1O60741 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.37□□□□□ -0.11
HCN1O60741 AC007191.1-201ENST00000623179 2995 ntBASIC14.37□□□□□ -0.11
HCN1O60741 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN1O60741 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.37□□□□□ -0.11
HCN1O60741 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
HCN1O60741 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.36□□□□□ -0.11
HCN1O60741 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCN1O60741 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCN1O60741 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HCN1O60741 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.36□□□□□ -0.11
HCN1O60741 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HCN1O60741 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.36□□□□□ -0.11
HCN1O60741 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCN1O60741 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCN1O60741 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HCN1O60741 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HCN1O60741 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HCN1O60741 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCN1O60741 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCN1O60741 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCN1O60741 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.36□□□□□ -0.11
HCN1O60741 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCN1O60741 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.36□□□□□ -0.11
HCN1O60741 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HCN1O60741 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.36□□□□□ -0.11
HCN1O60741 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.36□□□□□ -0.11
HCN1O60741 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HCN1O60741 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.36□□□□□ -0.11
HCN1O60741 RARRES2P5-201ENST00000564013 466 ntBASIC14.36□□□□□ -0.11
HCN1O60741 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.36□□□□□ -0.11
HCN1O60741 AC008494.3-201ENST00000606615 944 ntBASIC14.36□□□□□ -0.11
HCN1O60741 AC007431.3-201ENST00000623221 587 ntBASIC14.36□□□□□ -0.11
HCN1O60741 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.36□□□□□ -0.11
HCN1O60741 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HCN1O60741 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.36□□□□□ -0.11
HCN1O60741 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HCN1O60741 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCN1O60741 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HCN1O60741 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HCN1O60741 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCN1O60741 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCN1O60741 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCN1O60741 AC009090.5-201ENST00000624886 2285 ntBASIC14.36□□□□□ -0.11
HCN1O60741 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCN1O60741 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HCN1O60741 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
HCN1O60741 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCN1O60741 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCN1O60741 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.36□□□□□ -0.11
HCN1O60741 AC126365.1-201ENST00000578585 1514 ntBASIC14.36□□□□□ -0.11
HCN1O60741 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.36□□□□□ -0.11
HCN1O60741 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HCN1O60741 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCN1O60741 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCN1O60741 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HCN1O60741 KRT8P44-201ENST00000441609 1350 ntBASIC14.35□□□□□ -0.11
HCN1O60741 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.35□□□□□ -0.11
HCN1O60741 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCN1O60741 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.35□□□□□ -0.11
HCN1O60741 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCN1O60741 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCN1O60741 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCN1O60741 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
HCN1O60741 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.35□□□□□ -0.11
HCN1O60741 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCN1O60741 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCN1O60741 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HCN1O60741 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HCN1O60741 CICP23-201ENST00000605013 2741 ntBASIC14.35□□□□□ -0.11
HCN1O60741 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HCN1O60741 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
HCN1O60741 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HCN1O60741 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.35□□□□□ -0.11
HCN1O60741 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HCN1O60741 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms