Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
XRCC2O43543 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
XRCC2O43543 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
XRCC2O43543 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
XRCC2O43543 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
XRCC2O43543 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.34□□□□□ -0.27
XRCC2O43543 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
XRCC2O43543 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
XRCC2O43543 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
XRCC2O43543 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
XRCC2O43543 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
XRCC2O43543 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
XRCC2O43543 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
XRCC2O43543 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
XRCC2O43543 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.34□□□□□ -0.27
XRCC2O43543 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
XRCC2O43543 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.34□□□□□ -0.27
XRCC2O43543 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.34□□□□□ -0.27
XRCC2O43543 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.34□□□□□ -0.27
XRCC2O43543 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.34□□□□□ -0.27
XRCC2O43543 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
XRCC2O43543 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.34□□□□□ -0.27
XRCC2O43543 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.34□□□□□ -0.27
XRCC2O43543 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.34□□□□□ -0.27
XRCC2O43543 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.34□□□□□ -0.27
XRCC2O43543 AC004066.1-201ENST00000502488 802 ntBASIC13.34□□□□□ -0.27
XRCC2O43543 AC093214.1-201ENST00000511688 1107 ntBASIC13.34□□□□□ -0.27
XRCC2O43543 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.34□□□□□ -0.27
XRCC2O43543 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
XRCC2O43543 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
XRCC2O43543 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.34□□□□□ -0.27
XRCC2O43543 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
XRCC2O43543 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.34□□□□□ -0.27
XRCC2O43543 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
XRCC2O43543 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
XRCC2O43543 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
XRCC2O43543 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.34□□□□□ -0.27
XRCC2O43543 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.34□□□□□ -0.27
XRCC2O43543 AC004840.1-201ENST00000636359 365 ntBASIC13.34□□□□□ -0.27
XRCC2O43543 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
XRCC2O43543 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.34□□□□□ -0.27
XRCC2O43543 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.34□□□□□ -0.27
XRCC2O43543 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
XRCC2O43543 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.34□□□□□ -0.27
XRCC2O43543 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
XRCC2O43543 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.34□□□□□ -0.27
XRCC2O43543 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
XRCC2O43543 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
XRCC2O43543 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
XRCC2O43543 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
XRCC2O43543 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
XRCC2O43543 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
XRCC2O43543 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
XRCC2O43543 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.27
XRCC2O43543 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
XRCC2O43543 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.33□□□□□ -0.27
XRCC2O43543 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.33□□□□□ -0.27
XRCC2O43543 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
XRCC2O43543 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
XRCC2O43543 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
XRCC2O43543 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
XRCC2O43543 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
XRCC2O43543 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.33□□□□□ -0.28
XRCC2O43543 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
XRCC2O43543 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
XRCC2O43543 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
XRCC2O43543 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.33□□□□□ -0.28
XRCC2O43543 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
XRCC2O43543 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
XRCC2O43543 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
XRCC2O43543 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
XRCC2O43543 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
XRCC2O43543 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
XRCC2O43543 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
XRCC2O43543 MEP1AP4-201ENST00000423244 1087 ntBASIC13.33□□□□□ -0.28
XRCC2O43543 PMS2P2-201ENST00000425039 1128 ntBASIC13.33□□□□□ -0.28
XRCC2O43543 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.33□□□□□ -0.28
XRCC2O43543 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.33□□□□□ -0.28
XRCC2O43543 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.33□□□□□ -0.28
XRCC2O43543 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
XRCC2O43543 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
XRCC2O43543 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.33□□□□□ -0.28
XRCC2O43543 RFPL4AP1-201ENST00000530883 850 ntBASIC13.33□□□□□ -0.28
XRCC2O43543 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
XRCC2O43543 SAMD11P1-201ENST00000571429 661 ntBASIC13.33□□□□□ -0.28
XRCC2O43543 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.33□□□□□ -0.28
XRCC2O43543 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
XRCC2O43543 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.33□□□□□ -0.28
XRCC2O43543 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
XRCC2O43543 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
XRCC2O43543 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.33□□□□□ -0.28
XRCC2O43543 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
XRCC2O43543 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
XRCC2O43543 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
XRCC2O43543 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
XRCC2O43543 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
XRCC2O43543 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
XRCC2O43543 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
XRCC2O43543 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
XRCC2O43543 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms