Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RIPK2O43353 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RIPK2O43353 MED15P5-201ENST00000423150 992 ntBASIC15.54■□□□□ 0.08
RIPK2O43353 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.54■□□□□ 0.08
RIPK2O43353 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RIPK2O43353 ALG1L8P-201ENST00000533887 760 ntBASIC15.54■□□□□ 0.08
RIPK2O43353 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
RIPK2O43353 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
RIPK2O43353 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.54■□□□□ 0.08
RIPK2O43353 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RIPK2O43353 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RIPK2O43353 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RIPK2O43353 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RIPK2O43353 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RIPK2O43353 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RIPK2O43353 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.54■□□□□ 0.08
RIPK2O43353 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.54■□□□□ 0.08
RIPK2O43353 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RIPK2O43353 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RIPK2O43353 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RIPK2O43353 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RIPK2O43353 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RIPK2O43353 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RIPK2O43353 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RIPK2O43353 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RIPK2O43353 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.53■□□□□ 0.08
RIPK2O43353 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.53■□□□□ 0.08
RIPK2O43353 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RIPK2O43353 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.53■□□□□ 0.08
RIPK2O43353 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RIPK2O43353 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RIPK2O43353 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RIPK2O43353 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RIPK2O43353 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
RIPK2O43353 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
RIPK2O43353 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RIPK2O43353 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.53■□□□□ 0.08
RIPK2O43353 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
RIPK2O43353 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.53■□□□□ 0.08
RIPK2O43353 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.53■□□□□ 0.08
RIPK2O43353 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.53■□□□□ 0.08
RIPK2O43353 AC022447.6-201ENST00000515522 438 ntBASIC15.53■□□□□ 0.08
RIPK2O43353 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.53■□□□□ 0.08
RIPK2O43353 RN7SL828P-201ENST00000607615 303 ntBASIC15.53■□□□□ 0.08
RIPK2O43353 AC027601.4-201ENST00000611259 610 ntBASIC15.53■□□□□ 0.08
RIPK2O43353 FAM197Y3-203ENST00000618346 717 ntBASIC15.53■□□□□ 0.08
RIPK2O43353 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
RIPK2O43353 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.53■□□□□ 0.08
RIPK2O43353 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RIPK2O43353 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RIPK2O43353 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RIPK2O43353 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RIPK2O43353 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.53■□□□□ 0.08
RIPK2O43353 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
RIPK2O43353 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.53■□□□□ 0.08
RIPK2O43353 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RIPK2O43353 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RIPK2O43353 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RIPK2O43353 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RIPK2O43353 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RIPK2O43353 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RIPK2O43353 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RIPK2O43353 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.52■□□□□ 0.08
RIPK2O43353 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RIPK2O43353 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
RIPK2O43353 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RIPK2O43353 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.52■□□□□ 0.08
RIPK2O43353 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
RIPK2O43353 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.52■□□□□ 0.08
RIPK2O43353 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RIPK2O43353 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RIPK2O43353 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.52■□□□□ 0.08
RIPK2O43353 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.52■□□□□ 0.08
RIPK2O43353 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.52■□□□□ 0.08
RIPK2O43353 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RIPK2O43353 CICP17-201ENST00000418553 2377 ntBASIC15.52■□□□□ 0.08
RIPK2O43353 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RIPK2O43353 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RIPK2O43353 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RIPK2O43353 YBX2P1-201ENST00000394192 760 ntBASIC15.52■□□□□ 0.08
RIPK2O43353 AC023274.1-201ENST00000418278 595 ntBASIC15.52■□□□□ 0.08
RIPK2O43353 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.52■□□□□ 0.08
RIPK2O43353 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.52■□□□□ 0.08
RIPK2O43353 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.52■□□□□ 0.08
RIPK2O43353 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RIPK2O43353 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RIPK2O43353 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RIPK2O43353 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RIPK2O43353 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
RIPK2O43353 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RIPK2O43353 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RIPK2O43353 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
RIPK2O43353 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
RIPK2O43353 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RIPK2O43353 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RIPK2O43353 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RIPK2O43353 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.52■□□□□ 0.07
RIPK2O43353 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
RIPK2O43353 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RIPK2O43353 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms