Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
E2F3O00716 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
E2F3O00716 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
E2F3O00716 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.93□□□□□ -0.02
E2F3O00716 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.93□□□□□ -0.02
E2F3O00716 GAPDHP40-201ENST00000505218 1006 ntBASIC14.93□□□□□ -0.02
E2F3O00716 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
E2F3O00716 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
E2F3O00716 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.93□□□□□ -0.02
E2F3O00716 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.93□□□□□ -0.02
E2F3O00716 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.93□□□□□ -0.02
E2F3O00716 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.93□□□□□ -0.02
E2F3O00716 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
E2F3O00716 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.93□□□□□ -0.02
E2F3O00716 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
E2F3O00716 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.93□□□□□ -0.02
E2F3O00716 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.93□□□□□ -0.02
E2F3O00716 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
E2F3O00716 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
E2F3O00716 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
E2F3O00716 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
E2F3O00716 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.93□□□□□ -0.02
E2F3O00716 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
E2F3O00716 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
E2F3O00716 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
E2F3O00716 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.93□□□□□ -0.02
E2F3O00716 AC026748.1-201ENST00000624349 3251 ntBASIC14.93□□□□□ -0.02
E2F3O00716 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
E2F3O00716 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.93□□□□□ -0.02
E2F3O00716 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
E2F3O00716 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
E2F3O00716 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
E2F3O00716 CU639417.3-201ENST00000624240 1404 ntBASIC14.92□□□□□ -0.02
E2F3O00716 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
E2F3O00716 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
E2F3O00716 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.92□□□□□ -0.02
E2F3O00716 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
E2F3O00716 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
E2F3O00716 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
E2F3O00716 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
E2F3O00716 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
E2F3O00716 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.92□□□□□ -0.02
E2F3O00716 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.92□□□□□ -0.02
E2F3O00716 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.92□□□□□ -0.02
E2F3O00716 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.92□□□□□ -0.02
E2F3O00716 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
E2F3O00716 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
E2F3O00716 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.92□□□□□ -0.02
E2F3O00716 AL589987.1-201ENST00000453380 819 ntBASIC14.92□□□□□ -0.02
E2F3O00716 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.92□□□□□ -0.02
E2F3O00716 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
E2F3O00716 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.92□□□□□ -0.02
E2F3O00716 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
E2F3O00716 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.92□□□□□ -0.02
E2F3O00716 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.92□□□□□ -0.02
E2F3O00716 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.92□□□□□ -0.02
E2F3O00716 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.92□□□□□ -0.02
E2F3O00716 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.92□□□□□ -0.02
E2F3O00716 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.92□□□□□ -0.02
E2F3O00716 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.92□□□□□ -0.02
E2F3O00716 AC004840.1-201ENST00000636359 365 ntBASIC14.92□□□□□ -0.02
E2F3O00716 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
E2F3O00716 CLK3P2-201ENST00000427566 1453 ntBASIC14.92□□□□□ -0.02
E2F3O00716 AC007787.1-201ENST00000588095 1583 ntBASIC14.92□□□□□ -0.02
E2F3O00716 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
E2F3O00716 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.92□□□□□ -0.02
E2F3O00716 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
E2F3O00716 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
E2F3O00716 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
E2F3O00716 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
E2F3O00716 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
E2F3O00716 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.92□□□□□ -0.02
E2F3O00716 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
E2F3O00716 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.92□□□□□ -0.02
E2F3O00716 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
E2F3O00716 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.92□□□□□ -0.02
E2F3O00716 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.92□□□□□ -0.02
E2F3O00716 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
E2F3O00716 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.92□□□□□ -0.02
E2F3O00716 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
E2F3O00716 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
E2F3O00716 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
E2F3O00716 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.91□□□□□ -0.02
E2F3O00716 AC018529.2-202ENST00000611482 3087 ntBASIC14.91□□□□□ -0.02
E2F3O00716 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
E2F3O00716 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.91□□□□□ -0.02
E2F3O00716 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
E2F3O00716 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
E2F3O00716 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
E2F3O00716 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
E2F3O00716 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
E2F3O00716 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
E2F3O00716 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
E2F3O00716 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
E2F3O00716 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
E2F3O00716 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.91□□□□□ -0.02
E2F3O00716 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.91□□□□□ -0.02
E2F3O00716 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.91□□□□□ -0.02
E2F3O00716 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
E2F3O00716 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms