Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL21O00585 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.34□□□□□ -0.27
CCL21O00585 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CCL21O00585 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 AC067930.6-201ENST00000623257 4947 ntBASIC13.34□□□□□ -0.27
CCL21O00585 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CCL21O00585 SHC1P1-201ENST00000425230 1745 ntBASIC13.34□□□□□ -0.27
CCL21O00585 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CCL21O00585 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CCL21O00585 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
CCL21O00585 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CCL21O00585 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CCL21O00585 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.34□□□□□ -0.27
CCL21O00585 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL21O00585 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.34□□□□□ -0.27
CCL21O00585 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC13.34□□□□□ -0.27
CCL21O00585 RPL18P13-201ENST00000478088 569 ntBASIC13.34□□□□□ -0.27
CCL21O00585 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL21O00585 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
CCL21O00585 CFL1-214ENST00000534769 758 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL21O00585 RTN3P1-201ENST00000536295 711 ntBASIC13.34□□□□□ -0.27
CCL21O00585 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL21O00585 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CCL21O00585 MIR3147-201ENST00000577811 66 ntBASIC13.34□□□□□ -0.27
CCL21O00585 AF254983.2-201ENST00000612331 135 ntBASIC13.34□□□□□ -0.27
CCL21O00585 AP000346.4-201ENST00000614827 381 ntBASIC13.34□□□□□ -0.27
CCL21O00585 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.34□□□□□ -0.27
CCL21O00585 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CCL21O00585 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CCL21O00585 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CCL21O00585 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CCL21O00585 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 AC092127.1-201ENST00000567093 3455 ntBASIC13.34□□□□□ -0.27
CCL21O00585 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL21O00585 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CCL21O00585 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
CCL21O00585 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL21O00585 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCL21O00585 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.33□□□□□ -0.27
CCL21O00585 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCL21O00585 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCL21O00585 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCL21O00585 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCL21O00585 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL21O00585 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL21O00585 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL21O00585 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CCL21O00585 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CCL21O00585 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL21O00585 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL21O00585 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL21O00585 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL21O00585 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL21O00585 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL21O00585 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL21O00585 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL21O00585 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL21O00585 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CCL21O00585 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL21O00585 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL21O00585 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL21O00585 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL21O00585 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.33□□□□□ -0.28
CCL21O00585 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL21O00585 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL21O00585 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC13.33□□□□□ -0.28
CCL21O00585 RN7SKP175-201ENST00000408472 289 ntBASIC13.33□□□□□ -0.28
CCL21O00585 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL21O00585 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC13.33□□□□□ -0.28
CCL21O00585 FAM58BP-201ENST00000439056 645 ntBASIC13.33□□□□□ -0.28
CCL21O00585 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL21O00585 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL21O00585 IQSEC3P1-201ENST00000538799 536 ntBASIC13.33□□□□□ -0.28
CCL21O00585 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.33□□□□□ -0.28
CCL21O00585 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms