Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLIC1O00299 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLIC1O00299 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CLIC1O00299 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.45□□□□□ -0.1
CLIC1O00299 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLIC1O00299 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLIC1O00299 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLIC1O00299 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLIC1O00299 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLIC1O00299 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CLIC1O00299 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLIC1O00299 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLIC1O00299 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLIC1O00299 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.45□□□□□ -0.1
CLIC1O00299 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLIC1O00299 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLIC1O00299 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLIC1O00299 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLIC1O00299 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLIC1O00299 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLIC1O00299 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLIC1O00299 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
CLIC1O00299 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLIC1O00299 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLIC1O00299 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.44□□□□□ -0.1
CLIC1O00299 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
CLIC1O00299 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.44□□□□□ -0.1
CLIC1O00299 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLIC1O00299 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLIC1O00299 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLIC1O00299 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.44□□□□□ -0.1
CLIC1O00299 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CLIC1O00299 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLIC1O00299 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLIC1O00299 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLIC1O00299 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CLIC1O00299 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLIC1O00299 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLIC1O00299 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLIC1O00299 AC254562.1-201ENST00000417586 456 ntBASIC14.44□□□□□ -0.1
CLIC1O00299 BX842568.4-201ENST00000421222 227 ntBASIC14.44□□□□□ -0.1
CLIC1O00299 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLIC1O00299 RN7SL618P-201ENST00000477850 296 ntBASIC14.44□□□□□ -0.1
CLIC1O00299 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.44□□□□□ -0.1
CLIC1O00299 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.44□□□□□ -0.1
CLIC1O00299 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.44□□□□□ -0.1
CLIC1O00299 AC010336.2-201ENST00000564226 506 ntBASIC14.44□□□□□ -0.1
CLIC1O00299 AC051619.7-201ENST00000568314 623 ntBASIC14.44□□□□□ -0.1
CLIC1O00299 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
CLIC1O00299 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.44□□□□□ -0.1
CLIC1O00299 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.44□□□□□ -0.1
CLIC1O00299 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.44□□□□□ -0.1
CLIC1O00299 AL109936.8-201ENST00000641772 604 ntBASIC14.44□□□□□ -0.1
CLIC1O00299 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLIC1O00299 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLIC1O00299 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.44□□□□□ -0.1
CLIC1O00299 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.44□□□□□ -0.1
CLIC1O00299 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.44□□□□□ -0.1
CLIC1O00299 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.44□□□□□ -0.1
CLIC1O00299 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.44□□□□□ -0.1
CLIC1O00299 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CLIC1O00299 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CLIC1O00299 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLIC1O00299 LILRP1-201ENST00000444199 1370 ntBASIC14.44□□□□□ -0.1
CLIC1O00299 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.44□□□□□ -0.1
CLIC1O00299 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CLIC1O00299 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLIC1O00299 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CLIC1O00299 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CLIC1O00299 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
CLIC1O00299 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLIC1O00299 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLIC1O00299 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.44□□□□□ -0.1
CLIC1O00299 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.44□□□□□ -0.1
CLIC1O00299 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
CLIC1O00299 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.44□□□□□ -0.1
CLIC1O00299 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLIC1O00299 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLIC1O00299 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CLIC1O00299 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CLIC1O00299 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CLIC1O00299 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLIC1O00299 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLIC1O00299 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLIC1O00299 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.43□□□□□ -0.1
CLIC1O00299 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLIC1O00299 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.43□□□□□ -0.1
CLIC1O00299 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLIC1O00299 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.43□□□□□ -0.1
CLIC1O00299 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLIC1O00299 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CLIC1O00299 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLIC1O00299 LINC01230-201ENST00000625222 3017 ntBASIC14.43□□□□□ -0.1
CLIC1O00299 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLIC1O00299 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLIC1O00299 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLIC1O00299 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLIC1O00299 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.43□□□□□ -0.1
CLIC1O00299 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.43□□□□□ -0.1
CLIC1O00299 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms