Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 RASA4DP-201ENST00000460726 1199 ntBASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 TERF1P1-201ENST00000311003 1181 ntBASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SNHG20-202ENST00000434411 2143 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 BX664615.1-201ENST00000443558 458 ntBASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AC073335.2-201ENST00000610177 3441 ntBASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AC125807.2-201ENST00000513358 3514 ntBASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 INE2-201ENST00000630399 1874 ntBASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 POM121L14P-201ENST00000406100 1558 ntBASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 TPT1P11-201ENST00000458482 498 ntBASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.34□□□□□ -0.27
BOLA2-SMG1P6H3BVE0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms