Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 AF238378.1-201ENST00000526806 358 ntBASIC10.75□□□□□ -0.69
LINC01546A6NGU7 AC012640.2-201ENST00000561606 901 ntBASIC10.75□□□□□ -0.69
LINC01546A6NGU7 SAMD11P1-201ENST00000571429 661 ntBASIC10.75□□□□□ -0.69
LINC01546A6NGU7 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 AC117500.6-201ENST00000624871 588 ntBASIC10.75□□□□□ -0.69
LINC01546A6NGU7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 INVS-201ENST00000262456 2968 ntTSL 5 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 AP3S2-216ENST00000617003 1561 ntBASIC10.74□□□□□ -0.69
LINC01546A6NGU7 NCLP1-201ENST00000445357 1963 ntBASIC10.74□□□□□ -0.69
LINC01546A6NGU7 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 AC126755.1-201ENST00000525846 6405 ntBASIC10.74□□□□□ -0.69
LINC01546A6NGU7 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 MYADML-201ENST00000474610 2147 ntBASIC10.74□□□□□ -0.69
LINC01546A6NGU7 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 SLED1-202ENST00000512051 380 ntBASIC10.74□□□□□ -0.69
LINC01546A6NGU7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 RN7SL850P-201ENST00000579959 291 ntBASIC10.74□□□□□ -0.69
LINC01546A6NGU7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC10.74□□□□□ -0.69
LINC01546A6NGU7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms