Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC16.25■□□□□ 0.19
RCCD1A6NED2 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.25■□□□□ 0.19
RCCD1A6NED2 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RCCD1A6NED2 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RCCD1A6NED2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RCCD1A6NED2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.25■□□□□ 0.19
RCCD1A6NED2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RCCD1A6NED2 SERBP1P3-201ENST00000459980 809 ntBASIC16.25■□□□□ 0.19
RCCD1A6NED2 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RCCD1A6NED2 AC112482.1-201ENST00000492080 688 ntBASIC16.25■□□□□ 0.19
RCCD1A6NED2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.25■□□□□ 0.19
RCCD1A6NED2 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.25■□□□□ 0.19
RCCD1A6NED2 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.25■□□□□ 0.19
RCCD1A6NED2 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.25■□□□□ 0.19
RCCD1A6NED2 AC000095.1-201ENST00000603208 874 ntBASIC16.25■□□□□ 0.19
RCCD1A6NED2 AC074044.1-201ENST00000609673 707 ntBASIC16.25■□□□□ 0.19
RCCD1A6NED2 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.25■□□□□ 0.19
RCCD1A6NED2 SPDYE12P-201ENST00000618416 771 ntBASIC16.25■□□□□ 0.19
RCCD1A6NED2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.25■□□□□ 0.19
RCCD1A6NED2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RCCD1A6NED2 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RCCD1A6NED2 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RCCD1A6NED2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
RCCD1A6NED2 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RCCD1A6NED2 AC023090.2-201ENST00000625182 2110 ntBASIC16.25■□□□□ 0.19
RCCD1A6NED2 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
RCCD1A6NED2 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RCCD1A6NED2 PPP1R26P4-201ENST00000619065 3527 ntBASIC16.25■□□□□ 0.19
RCCD1A6NED2 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RCCD1A6NED2 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RCCD1A6NED2 BEND3P1-201ENST00000421591 1944 ntBASIC16.25■□□□□ 0.19
RCCD1A6NED2 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RCCD1A6NED2 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RCCD1A6NED2 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.25■□□□□ 0.19
RCCD1A6NED2 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RCCD1A6NED2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RCCD1A6NED2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RCCD1A6NED2 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RCCD1A6NED2 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RCCD1A6NED2 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RCCD1A6NED2 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC16.24■□□□□ 0.19
RCCD1A6NED2 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RCCD1A6NED2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.24■□□□□ 0.19
RCCD1A6NED2 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.24■□□□□ 0.19
RCCD1A6NED2 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RCCD1A6NED2 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RCCD1A6NED2 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RCCD1A6NED2 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RCCD1A6NED2 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.24■□□□□ 0.19
RCCD1A6NED2 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RCCD1A6NED2 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.24■□□□□ 0.19
RCCD1A6NED2 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RCCD1A6NED2 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RCCD1A6NED2 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
RCCD1A6NED2 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.24■□□□□ 0.19
RCCD1A6NED2 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RCCD1A6NED2 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC16.24■□□□□ 0.19
RCCD1A6NED2 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.24■□□□□ 0.19
RCCD1A6NED2 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.24■□□□□ 0.19
RCCD1A6NED2 AL512356.2-201ENST00000546955 174 ntBASIC16.24■□□□□ 0.19
RCCD1A6NED2 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RCCD1A6NED2 AC051619.7-201ENST00000568314 623 ntBASIC16.24■□□□□ 0.19
RCCD1A6NED2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.24■□□□□ 0.19
RCCD1A6NED2 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.24■□□□□ 0.19
RCCD1A6NED2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.24■□□□□ 0.19
RCCD1A6NED2 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RCCD1A6NED2 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RCCD1A6NED2 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RCCD1A6NED2 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RCCD1A6NED2 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.24■□□□□ 0.19
RCCD1A6NED2 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.24■□□□□ 0.19
RCCD1A6NED2 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RCCD1A6NED2 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RCCD1A6NED2 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RCCD1A6NED2 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RCCD1A6NED2 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RCCD1A6NED2 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RCCD1A6NED2 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RCCD1A6NED2 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RCCD1A6NED2 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RCCD1A6NED2 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCCD1A6NED2 AC055811.4-201ENST00000624039 1754 ntBASIC16.23■□□□□ 0.19
RCCD1A6NED2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCCD1A6NED2 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.23■□□□□ 0.19
RCCD1A6NED2 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RCCD1A6NED2 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RCCD1A6NED2 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC16.23■□□□□ 0.19
RCCD1A6NED2 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RCCD1A6NED2 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RCCD1A6NED2 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RCCD1A6NED2 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCCD1A6NED2 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCCD1A6NED2 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RCCD1A6NED2 AL691447.1-201ENST00000419456 387 ntBASIC16.23■□□□□ 0.19
RCCD1A6NED2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.23■□□□□ 0.19
RCCD1A6NED2 TPT1P11-201ENST00000458482 498 ntBASIC16.23■□□□□ 0.19
RCCD1A6NED2 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RCCD1A6NED2 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RCCD1A6NED2 AL138828.2-201ENST00000615812 383 ntBASIC16.23■□□□□ 0.19
RCCD1A6NED2 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms