Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 AC241585.1-201ENST00000433527 519 ntBASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF11Q9Y3C5 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RNF11Q9Y3C5 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RNF11Q9Y3C5 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.96□□□□□ -0.02
RNF11Q9Y3C5 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RNF11Q9Y3C5 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RNF11Q9Y3C5 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RNF11Q9Y3C5 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RNF11Q9Y3C5 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 AL161772.1-201ENST00000610494 4412 ntBASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 AC009477.1-201ENST00000452936 217 ntBASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 TIMM17BP1-201ENST00000545713 516 ntBASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 AC009407.1-201ENST00000568958 598 ntBASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 AC126755.1-201ENST00000525846 6405 ntBASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF11Q9Y3C5 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF11Q9Y3C5 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF11Q9Y3C5 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF11Q9Y3C5 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF11Q9Y3C5 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.94□□□□□ -0.02
RNF11Q9Y3C5 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RNF11Q9Y3C5 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF11Q9Y3C5 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF11Q9Y3C5 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF11Q9Y3C5 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.94□□□□□ -0.02
RNF11Q9Y3C5 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms