Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 AC016397.2-201ENST00000624848 1985 ntBASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 AL031284.1-201ENST00000419297 478 ntBASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 RNPS1P1-201ENST00000507437 918 ntBASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.62□□□□□ -0.07
LRCH1Q9Y2L9 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 AC079776.4-201ENST00000511039 504 ntBASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 SART3-203ENST00000546611 1184 ntBASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 AC005412.3-201ENST00000580309 715 ntBASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 AC073592.4-201ENST00000623827 446 ntBASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 AC068760.1-201ENST00000493579 1953 ntBASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LRCH1Q9Y2L9 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms