Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERGIC3Q9Y282 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ERGIC3Q9Y282 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERGIC3Q9Y282 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
ERGIC3Q9Y282 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ERGIC3Q9Y282 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERGIC3Q9Y282 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.04□□□□□ -0.16
ERGIC3Q9Y282 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERGIC3Q9Y282 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERGIC3Q9Y282 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ERGIC3Q9Y282 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.04□□□□□ -0.16
ERGIC3Q9Y282 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERGIC3Q9Y282 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERGIC3Q9Y282 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERGIC3Q9Y282 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERGIC3Q9Y282 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERGIC3Q9Y282 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
ERGIC3Q9Y282 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ERGIC3Q9Y282 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ERGIC3Q9Y282 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.04□□□□□ -0.16
ERGIC3Q9Y282 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 HCG4P8-203ENST00000443049 980 ntBASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 AC061975.2-201ENST00000581722 295 ntBASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERGIC3Q9Y282 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ERGIC3Q9Y282 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ERGIC3Q9Y282 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
ERGIC3Q9Y282 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.02□□□□□ -0.16
ERGIC3Q9Y282 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ERGIC3Q9Y282 MTHFR-210ENST00000641407 2387 ntBASIC14.02□□□□□ -0.16
ERGIC3Q9Y282 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ERGIC3Q9Y282 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
ERGIC3Q9Y282 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ERGIC3Q9Y282 AP001267.2-201ENST00000532619 2086 ntBASIC14.02□□□□□ -0.16
ERGIC3Q9Y282 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.02□□□□□ -0.16
ERGIC3Q9Y282 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ERGIC3Q9Y282 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.02□□□□□ -0.16
ERGIC3Q9Y282 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.02□□□□□ -0.16
ERGIC3Q9Y282 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ERGIC3Q9Y282 AP002414.3-201ENST00000589352 1468 ntBASIC14.02□□□□□ -0.16
ERGIC3Q9Y282 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ERGIC3Q9Y282 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ERGIC3Q9Y282 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
ERGIC3Q9Y282 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.02□□□□□ -0.17
ERGIC3Q9Y282 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
ERGIC3Q9Y282 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.02□□□□□ -0.17
ERGIC3Q9Y282 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
ERGIC3Q9Y282 TSPY19P-201ENST00000418461 509 ntBASIC14.02□□□□□ -0.17
ERGIC3Q9Y282 TSPY18P-201ENST00000441642 509 ntBASIC14.02□□□□□ -0.17
ERGIC3Q9Y282 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.02□□□□□ -0.17
ERGIC3Q9Y282 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms