Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYNPO2Q9UMS6 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SYNPO2Q9UMS6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.37■□□□□ 0.37
SYNPO2Q9UMS6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.37■□□□□ 0.37
SYNPO2Q9UMS6 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.37■□□□□ 0.37
SYNPO2Q9UMS6 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.37■□□□□ 0.37
SYNPO2Q9UMS6 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.37■□□□□ 0.37
SYNPO2Q9UMS6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 AL162727.3-201ENST00000635661 2787 ntBASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 AL035414.1-201ENST00000451327 857 ntBASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.36■□□□□ 0.37
SYNPO2Q9UMS6 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 AL109954.1-202ENST00000564051 2148 ntBASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 BCYRN1-201ENST00000418539 200 ntBASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 AC016700.1-201ENST00000429424 312 ntBASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 AC012441.2-201ENST00000444843 739 ntBASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 PUDPP3-201ENST00000445368 636 ntBASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 AC021723.1-201ENST00000486306 515 ntBASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 AC106794.1-201ENST00000506935 792 ntBASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 AC100827.2-201ENST00000563214 1194 ntBASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 RN7SL163P-201ENST00000583100 276 ntBASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 AL451050.2-201ENST00000606967 682 ntBASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYNPO2Q9UMS6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms