Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.52□□□□□ -0.08
RIMS3Q9UJD0 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.52□□□□□ -0.08
RIMS3Q9UJD0 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
RIMS3Q9UJD0 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RIMS3Q9UJD0 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RIMS3Q9UJD0 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RIMS3Q9UJD0 AC126755.1-201ENST00000525846 6405 ntBASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 MIR940-201ENST00000401276 94 ntBASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 MCCD1P2-201ENST00000423228 335 ntBASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 TIMM8BP1-201ENST00000452384 211 ntBASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 AC040169.1-201ENST00000565382 521 ntBASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 AL121894.2-201ENST00000602977 491 ntBASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RIMS3Q9UJD0 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 YBX2P1-201ENST00000394192 760 ntBASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 AC136604.1-201ENST00000418535 575 ntBASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 ACTG1P14-201ENST00000446382 1122 ntBASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 AC084121.4-201ENST00000641598 221 ntBASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 AF228730.8-201ENST00000642140 221 ntBASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
RIMS3Q9UJD0 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.5□□□□□ -0.09
RIMS3Q9UJD0 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RIMS3Q9UJD0 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RIMS3Q9UJD0 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.5□□□□□ -0.09
RIMS3Q9UJD0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RIMS3Q9UJD0 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
RIMS3Q9UJD0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RIMS3Q9UJD0 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RIMS3Q9UJD0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RIMS3Q9UJD0 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RIMS3Q9UJD0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RIMS3Q9UJD0 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RIMS3Q9UJD0 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RIMS3Q9UJD0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
RIMS3Q9UJD0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms