Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 PKD1P5-201ENST00000532415 10291 ntBASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 AL008638.5-201ENST00000623814 1298 ntBASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KIAA1549Q9HCM3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 AL139099.5-201ENST00000635274 300 ntBASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 TNRC18P2-201ENST00000417666 2714 ntBASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
KIAA1549Q9HCM3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 BTBD6P1-201ENST00000412176 1267 ntBASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 HIST2H2BB-201ENST00000449108 381 ntBASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 PFN1P12-201ENST00000455938 534 ntBASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 AC100850.1-201ENST00000506768 649 ntBASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 RNA5SP486-201ENST00000515961 83 ntBASIC13.47□□□□□ -0.25
KIAA1549Q9HCM3 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms