Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.52□□□□□ -0.09
BHLHE41Q9C0J9 AL158212.4-201ENST00000624062 1286 ntBASIC14.52□□□□□ -0.09
BHLHE41Q9C0J9 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
BHLHE41Q9C0J9 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
BHLHE41Q9C0J9 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BHLHE41Q9C0J9 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
BHLHE41Q9C0J9 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
BHLHE41Q9C0J9 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.52□□□□□ -0.09
BHLHE41Q9C0J9 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.52□□□□□ -0.09
BHLHE41Q9C0J9 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
BHLHE41Q9C0J9 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BHLHE41Q9C0J9 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.52□□□□□ -0.09
BHLHE41Q9C0J9 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
BHLHE41Q9C0J9 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.52□□□□□ -0.09
BHLHE41Q9C0J9 OR2I1P-210ENST00000642037 4691 ntBASIC14.52□□□□□ -0.09
BHLHE41Q9C0J9 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.52□□□□□ -0.09
BHLHE41Q9C0J9 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BHLHE41Q9C0J9 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.52□□□□□ -0.09
BHLHE41Q9C0J9 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BHLHE41Q9C0J9 AC007191.1-201ENST00000623179 2995 ntBASIC14.52□□□□□ -0.09
BHLHE41Q9C0J9 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BHLHE41Q9C0J9 AC005089.1-201ENST00000619486 2241 ntBASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 LILRP1-201ENST00000444199 1370 ntBASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 PMS2P2-201ENST00000425039 1128 ntBASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 AC009477.1-201ENST00000452936 217 ntBASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 AC093028.1-201ENST00000622998 982 ntBASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
BHLHE41Q9C0J9 AL359258.3-201ENST00000622910 2331 ntBASIC14.5□□□□□ -0.09
BHLHE41Q9C0J9 AC140479.7-201ENST00000636301 2332 ntBASIC14.5□□□□□ -0.09
BHLHE41Q9C0J9 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
BHLHE41Q9C0J9 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
BHLHE41Q9C0J9 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
BHLHE41Q9C0J9 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BHLHE41Q9C0J9 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
BHLHE41Q9C0J9 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BHLHE41Q9C0J9 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BHLHE41Q9C0J9 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.5□□□□□ -0.09
BHLHE41Q9C0J9 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.5□□□□□ -0.09
BHLHE41Q9C0J9 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
BHLHE41Q9C0J9 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
BHLHE41Q9C0J9 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
BHLHE41Q9C0J9 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.5□□□□□ -0.09
BHLHE41Q9C0J9 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BHLHE41Q9C0J9 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
BHLHE41Q9C0J9 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.5□□□□□ -0.09
BHLHE41Q9C0J9 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
BHLHE41Q9C0J9 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
BHLHE41Q9C0J9 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
BHLHE41Q9C0J9 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BHLHE41Q9C0J9 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.5□□□□□ -0.09
BHLHE41Q9C0J9 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.5□□□□□ -0.09
BHLHE41Q9C0J9 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
BHLHE41Q9C0J9 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
BHLHE41Q9C0J9 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.5□□□□□ -0.09
BHLHE41Q9C0J9 MIR943-201ENST00000401286 94 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms