Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.99□□□□□ -0.17
RSPO3Q9BXY4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 SPDYE19P-201ENST00000338590 713 ntBASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 DOC2GP-202ENST00000514950 1163 ntBASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 AC152010.1-201ENST00000415779 2006 ntBASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
RSPO3Q9BXY4 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 AC018665.1-201ENST00000622927 1362 ntBASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 TPRX2P-201ENST00000535362 881 ntBASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 SPDYE22P-201ENST00000582158 798 ntBASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.97□□□□□ -0.17
RSPO3Q9BXY4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms