Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 AC011270.2-201ENST00000624293 2550 ntBASIC17.31■□□□□ 0.36
SYNGAP1Q96PV0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 AC022616.1-201ENST00000518688 554 ntBASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 PPY2P-201ENST00000582808 702 ntBASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 ZACNP1-201ENST00000612259 710 ntBASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 AC092384.3-202ENST00000564646 2873 ntBASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SYNGAP1Q96PV0 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 AL662890.1-201ENST00000396818 632 ntBASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 SAMD11P1-201ENST00000571429 661 ntBASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 AC073413.1-201ENST00000603927 732 ntBASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 AC026740.1-201ENST00000607068 791 ntBASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SYNGAP1Q96PV0 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.28■□□□□ 0.36
SYNGAP1Q96PV0 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.28■□□□□ 0.36
SYNGAP1Q96PV0 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SYNGAP1Q96PV0 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYNGAP1Q96PV0 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYNGAP1Q96PV0 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYNGAP1Q96PV0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.28■□□□□ 0.36
SYNGAP1Q96PV0 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.28■□□□□ 0.36
SYNGAP1Q96PV0 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.28■□□□□ 0.36
SYNGAP1Q96PV0 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SYNGAP1Q96PV0 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.28■□□□□ 0.36
SYNGAP1Q96PV0 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYNGAP1Q96PV0 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.28■□□□□ 0.36
SYNGAP1Q96PV0 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.28■□□□□ 0.36
SYNGAP1Q96PV0 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SYNGAP1Q96PV0 AL451050.2-201ENST00000606967 682 ntBASIC17.28■□□□□ 0.36
SYNGAP1Q96PV0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.28■□□□□ 0.36
SYNGAP1Q96PV0 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.28■□□□□ 0.36
SYNGAP1Q96PV0 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms