Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
LRCH3Q96II8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH3Q96II8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.46■□□□□ 0.23
LRCH3Q96II8 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH3Q96II8 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH3Q96II8 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LRCH3Q96II8 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH3Q96II8 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH3Q96II8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH3Q96II8 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH3Q96II8 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH3Q96II8 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRCH3Q96II8 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.46■□□□□ 0.23
LRCH3Q96II8 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LRCH3Q96II8 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LRCH3Q96II8 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
LRCH3Q96II8 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH3Q96II8 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH3Q96II8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH3Q96II8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
LRCH3Q96II8 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH3Q96II8 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.45■□□□□ 0.22
LRCH3Q96II8 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.45■□□□□ 0.22
LRCH3Q96II8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.45■□□□□ 0.22
LRCH3Q96II8 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH3Q96II8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
LRCH3Q96II8 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH3Q96II8 LINC00554-201ENST00000564841 3011 ntBASIC16.45■□□□□ 0.22
LRCH3Q96II8 Z69890.1-201ENST00000382990 339 ntBASIC16.45■□□□□ 0.22
LRCH3Q96II8 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LRCH3Q96II8 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.45■□□□□ 0.22
LRCH3Q96II8 AC005324.6-201ENST00000587972 613 ntBASIC16.45■□□□□ 0.22
LRCH3Q96II8 AC073911.3-201ENST00000624401 631 ntBASIC16.45■□□□□ 0.22
LRCH3Q96II8 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LRCH3Q96II8 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.45■□□□□ 0.22
LRCH3Q96II8 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH3Q96II8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LRCH3Q96II8 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH3Q96II8 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.45■□□□□ 0.22
LRCH3Q96II8 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.45■□□□□ 0.22
LRCH3Q96II8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH3Q96II8 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LRCH3Q96II8 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.45■□□□□ 0.22
LRCH3Q96II8 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCH3Q96II8 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LRCH3Q96II8 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.44■□□□□ 0.22
LRCH3Q96II8 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH3Q96II8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH3Q96II8 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH3Q96II8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LRCH3Q96II8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH3Q96II8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH3Q96II8 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH3Q96II8 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH3Q96II8 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH3Q96II8 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC16.44■□□□□ 0.22
LRCH3Q96II8 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
LRCH3Q96II8 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH3Q96II8 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH3Q96II8 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
LRCH3Q96II8 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH3Q96II8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LRCH3Q96II8 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.44■□□□□ 0.22
LRCH3Q96II8 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.44■□□□□ 0.22
LRCH3Q96II8 POM121L8P-201ENST00000417732 1281 ntBASIC16.44■□□□□ 0.22
LRCH3Q96II8 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LRCH3Q96II8 POM121L9P-203ENST00000441984 1285 ntBASIC16.44■□□□□ 0.22
LRCH3Q96II8 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC16.44■□□□□ 0.22
LRCH3Q96II8 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC16.44■□□□□ 0.22
LRCH3Q96II8 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.44■□□□□ 0.22
LRCH3Q96II8 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
LRCH3Q96II8 SNORD3B-2-202ENST00000571722 791 ntBASIC16.44■□□□□ 0.22
LRCH3Q96II8 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC16.44■□□□□ 0.22
LRCH3Q96II8 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.44■□□□□ 0.22
LRCH3Q96II8 AP000240.1-201ENST00000609910 452 ntBASIC16.44■□□□□ 0.22
LRCH3Q96II8 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.44■□□□□ 0.22
LRCH3Q96II8 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH3Q96II8 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH3Q96II8 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH3Q96II8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH3Q96II8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH3Q96II8 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH3Q96II8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH3Q96II8 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH3Q96II8 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
LRCH3Q96II8 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LRCH3Q96II8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LRCH3Q96II8 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH3Q96II8 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH3Q96II8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH3Q96II8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH3Q96II8 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH3Q96II8 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LRCH3Q96II8 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH3Q96II8 CROCCP1-201ENST00000426910 5675 ntBASIC16.43■□□□□ 0.22
LRCH3Q96II8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH3Q96II8 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH3Q96II8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH3Q96II8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH3Q96II8 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms