Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP2A3Q93084 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP2A3Q93084 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP2A3Q93084 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP2A3Q93084 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP2A3Q93084 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP2A3Q93084 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP2A3Q93084 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 CICP13-201ENST00000422015 2789 ntBASIC16.17■□□□□ 0.18
ATP2A3Q93084 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP2A3Q93084 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP2A3Q93084 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP2A3Q93084 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP2A3Q93084 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP2A3Q93084 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATP2A3Q93084 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP2A3Q93084 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATP2A3Q93084 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATP2A3Q93084 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP2A3Q93084 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP2A3Q93084 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATP2A3Q93084 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP2A3Q93084 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP2A3Q93084 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATP2A3Q93084 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
ATP2A3Q93084 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP2A3Q93084 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATP2A3Q93084 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATP2A3Q93084 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATP2A3Q93084 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATP2A3Q93084 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.17■□□□□ 0.18
ATP2A3Q93084 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATP2A3Q93084 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ATP2A3Q93084 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.16■□□□□ 0.18
ATP2A3Q93084 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.16■□□□□ 0.18
ATP2A3Q93084 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.16■□□□□ 0.18
ATP2A3Q93084 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
ATP2A3Q93084 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP2A3Q93084 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP2A3Q93084 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ATP2A3Q93084 AC087481.3-201ENST00000602886 1894 ntBASIC16.16■□□□□ 0.18
ATP2A3Q93084 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.16■□□□□ 0.18
ATP2A3Q93084 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
ATP2A3Q93084 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP2A3Q93084 AC099063.4-201ENST00000641099 1602 ntBASIC16.16■□□□□ 0.18
ATP2A3Q93084 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP2A3Q93084 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.16■□□□□ 0.18
ATP2A3Q93084 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP2A3Q93084 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP2A3Q93084 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP2A3Q93084 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATP2A3Q93084 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
ATP2A3Q93084 AC136621.1-201ENST00000624017 2304 ntBASIC16.16■□□□□ 0.18
ATP2A3Q93084 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP2A3Q93084 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP2A3Q93084 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.16■□□□□ 0.18
ATP2A3Q93084 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP2A3Q93084 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ATP2A3Q93084 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.16■□□□□ 0.18
ATP2A3Q93084 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ATP2A3Q93084 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.16■□□□□ 0.18
ATP2A3Q93084 BCRP2-202ENST00000447763 634 ntBASIC16.16■□□□□ 0.18
ATP2A3Q93084 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
ATP2A3Q93084 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATP2A3Q93084 AC092658.1-201ENST00000505836 891 ntBASIC16.16■□□□□ 0.18
ATP2A3Q93084 BCRP6-201ENST00000510112 632 ntBASIC16.16■□□□□ 0.18
ATP2A3Q93084 BCRP7-201ENST00000511549 544 ntBASIC16.16■□□□□ 0.18
ATP2A3Q93084 AP001063.1-201ENST00000568332 529 ntBASIC16.16■□□□□ 0.18
ATP2A3Q93084 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.16■□□□□ 0.18
ATP2A3Q93084 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.16■□□□□ 0.18
ATP2A3Q93084 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.16■□□□□ 0.18
ATP2A3Q93084 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.16■□□□□ 0.18
ATP2A3Q93084 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.16■□□□□ 0.18
ATP2A3Q93084 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms