Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 AC079781.3-201ENST00000449110 356 ntBASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 AL121912.1-201ENST00000603683 238 ntBASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 KRT8P22-201ENST00000562317 1415 ntBASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CKAP2Q8WWK9 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 HADH-202ENST00000403312 1752 ntTSL 5 BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 AC067750.1-201ENST00000608826 6545 ntBASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CKAP2Q8WWK9 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CKAP2Q8WWK9 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
CKAP2Q8WWK9 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
CKAP2Q8WWK9 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
CKAP2Q8WWK9 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
CKAP2Q8WWK9 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CKAP2Q8WWK9 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CKAP2Q8WWK9 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
CKAP2Q8WWK9 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.21■□□□□ 0.02
CKAP2Q8WWK9 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms