Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 AC005252.2-201ENST00000624630 1141 ntBASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC148Q8NFR7 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 AP005018.1-201ENST00000525475 301 ntBASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 AL596325.1-201ENST00000563991 1082 ntBASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 AP001063.1-201ENST00000568332 529 ntBASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCDC148Q8NFR7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 AC009486.1-201ENST00000569860 813 ntBASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 CLUHP6-201ENST00000580789 941 ntBASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 CU639417.3-201ENST00000624240 1404 ntBASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 AP000845.1-201ENST00000581677 2131 ntBASIC17.62■□□□□ 0.41
CCDC148Q8NFR7 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms