Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
COMMD1Q8N668 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.81□□□□□ -0.36
COMMD1Q8N668 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.81□□□□□ -0.36
COMMD1Q8N668 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.81□□□□□ -0.36
COMMD1Q8N668 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.81□□□□□ -0.36
COMMD1Q8N668 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
COMMD1Q8N668 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.81□□□□□ -0.36
COMMD1Q8N668 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.81□□□□□ -0.36
COMMD1Q8N668 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
COMMD1Q8N668 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
COMMD1Q8N668 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.81□□□□□ -0.36
COMMD1Q8N668 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.81□□□□□ -0.36
COMMD1Q8N668 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 AC051619.7-201ENST00000568314 623 ntBASIC12.81□□□□□ -0.36
COMMD1Q8N668 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.81□□□□□ -0.36
COMMD1Q8N668 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.81□□□□□ -0.36
COMMD1Q8N668 AL158211.3-201ENST00000607385 239 ntBASIC12.81□□□□□ -0.36
COMMD1Q8N668 AC007967.4-201ENST00000614700 386 ntBASIC12.81□□□□□ -0.36
COMMD1Q8N668 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.81□□□□□ -0.36
COMMD1Q8N668 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
COMMD1Q8N668 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 ZBED1P1-201ENST00000502364 1930 ntBASIC12.81□□□□□ -0.36
COMMD1Q8N668 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
COMMD1Q8N668 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
COMMD1Q8N668 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 AP3S2-216ENST00000617003 1561 ntBASIC12.81□□□□□ -0.36
COMMD1Q8N668 AC092135.3-201ENST00000624151 1846 ntBASIC12.81□□□□□ -0.36
COMMD1Q8N668 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
COMMD1Q8N668 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
COMMD1Q8N668 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
COMMD1Q8N668 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 HAUS4P1-201ENST00000406739 1145 ntBASIC12.8□□□□□ -0.36
COMMD1Q8N668 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 AC093724.1-201ENST00000448659 1027 ntBASIC12.8□□□□□ -0.36
COMMD1Q8N668 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 AC069120.2-201ENST00000524091 540 ntBASIC12.8□□□□□ -0.36
COMMD1Q8N668 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 AC026979.3-201ENST00000607315 403 ntBASIC12.8□□□□□ -0.36
COMMD1Q8N668 AL365330.1-201ENST00000607459 531 ntBASIC12.8□□□□□ -0.36
COMMD1Q8N668 AC093512.1-201ENST00000617969 520 ntBASIC12.8□□□□□ -0.36
COMMD1Q8N668 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
COMMD1Q8N668 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
COMMD1Q8N668 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms