Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 AC118758.2-201ENST00000614242 2813 ntBASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 AP001267.2-201ENST00000532619 2086 ntBASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP4Q6PIL6 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 NUS1P2-201ENST00000417358 873 ntBASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 PNN-202ENST00000553331 656 ntTSL 3 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 AC114341.1-201ENST00000618070 349 ntBASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 NUTM2HP-201ENST00000442076 2498 ntBASIC11.92□□□□□ -0.5
KCNIP4Q6PIL6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 HAL-202ENST00000538703 2637 ntTSL 2 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
KCNIP4Q6PIL6 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms