Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.09■□□□□ 0.17
RNF43Q68DV7 AC124283.3-201ENST00000570869 594 ntBASIC16.09■□□□□ 0.17
RNF43Q68DV7 AC015910.1-201ENST00000579400 975 ntBASIC16.09■□□□□ 0.17
RNF43Q68DV7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.09■□□□□ 0.17
RNF43Q68DV7 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.09■□□□□ 0.17
RNF43Q68DV7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF43Q68DV7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF43Q68DV7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF43Q68DV7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF43Q68DV7 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF43Q68DV7 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF43Q68DV7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF43Q68DV7 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF43Q68DV7 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF43Q68DV7 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF43Q68DV7 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF43Q68DV7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF43Q68DV7 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF43Q68DV7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF43Q68DV7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RNF43Q68DV7 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF43Q68DV7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF43Q68DV7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF43Q68DV7 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RNF43Q68DV7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
RNF43Q68DV7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.08■□□□□ 0.17
RNF43Q68DV7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.08■□□□□ 0.17
RNF43Q68DV7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RNF43Q68DV7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.08■□□□□ 0.17
RNF43Q68DV7 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
RNF43Q68DV7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.08■□□□□ 0.17
RNF43Q68DV7 AC090616.6-203ENST00000579186 1945 ntBASIC16.08■□□□□ 0.16
RNF43Q68DV7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF43Q68DV7 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RNF43Q68DV7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RNF43Q68DV7 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF43Q68DV7 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF43Q68DV7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.08■□□□□ 0.16
RNF43Q68DV7 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
RNF43Q68DV7 AC092933.1-201ENST00000393644 945 ntBASIC16.08■□□□□ 0.16
RNF43Q68DV7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF43Q68DV7 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF43Q68DV7 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RNF43Q68DV7 GAPDHP40-201ENST00000505218 1006 ntBASIC16.08■□□□□ 0.16
RNF43Q68DV7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.08■□□□□ 0.16
RNF43Q68DV7 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.08■□□□□ 0.16
RNF43Q68DV7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.08■□□□□ 0.16
RNF43Q68DV7 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
RNF43Q68DV7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
RNF43Q68DV7 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF43Q68DV7 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF43Q68DV7 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF43Q68DV7 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RNF43Q68DV7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF43Q68DV7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF43Q68DV7 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF43Q68DV7 AC091951.1-201ENST00000512854 2465 ntBASIC16.08■□□□□ 0.16
RNF43Q68DV7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
RNF43Q68DV7 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF43Q68DV7 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF43Q68DV7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
RNF43Q68DV7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RNF43Q68DV7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF43Q68DV7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF43Q68DV7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF43Q68DV7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.08■□□□□ 0.16
RNF43Q68DV7 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF43Q68DV7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
RNF43Q68DV7 AC112693.3-201ENST00000624819 1983 ntBASIC16.07■□□□□ 0.16
RNF43Q68DV7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF43Q68DV7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
RNF43Q68DV7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF43Q68DV7 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RNF43Q68DV7 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF43Q68DV7 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF43Q68DV7 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF43Q68DV7 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
RNF43Q68DV7 KRT43P-201ENST00000434019 910 ntBASIC16.07■□□□□ 0.16
RNF43Q68DV7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF43Q68DV7 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF43Q68DV7 CROCCP4-201ENST00000457096 498 ntBASIC16.07■□□□□ 0.16
RNF43Q68DV7 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF43Q68DV7 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF43Q68DV7 AC015936.2-201ENST00000593177 259 ntBASIC16.07■□□□□ 0.16
RNF43Q68DV7 AC008735.3-201ENST00000596646 500 ntBASIC16.07■□□□□ 0.16
RNF43Q68DV7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF43Q68DV7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF43Q68DV7 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF43Q68DV7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RNF43Q68DV7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF43Q68DV7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF43Q68DV7 AC105250.1-201ENST00000509378 2057 ntBASIC16.07■□□□□ 0.16
RNF43Q68DV7 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF43Q68DV7 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF43Q68DV7 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF43Q68DV7 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF43Q68DV7 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF43Q68DV7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF43Q68DV7 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF43Q68DV7 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms