Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 AL135901.1-201ENST00000451812 333 ntBASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 AP000358.1-201ENST00000456260 156 ntBASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 AC093909.3-201ENST00000504783 336 ntBASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 GCOM2-201ENST00000509133 1104 ntBASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 HLA-DMA-203ENST00000395305 777 ntBASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 KHSRPP1-201ENST00000427983 1768 ntBASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13DQ5THJ4 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 AC092580.1-201ENST00000433998 658 ntBASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 ZBED1P1-201ENST00000502364 1930 ntBASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 KRT8P28-201ENST00000433288 1390 ntBASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 PFN2-206ENST00000461930 606 ntTSL 4 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 ALG1L6P-201ENST00000515248 758 ntBASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 LINC00431-202ENST00000636375 159 ntBASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 AC025183.3-201ENST00000623526 1482 ntBASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 AC006504.5-208ENST00000588784 2401 ntBASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13DQ5THJ4 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms