Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.82□□□□□ -0.2
CDK5Q00535 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 AL360270.3-201ENST00000609118 1348 ntBASIC13.82□□□□□ -0.2
CDK5Q00535 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CDK5Q00535 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDK5Q00535 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDK5Q00535 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.81□□□□□ -0.2
CDK5Q00535 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.81□□□□□ -0.2
CDK5Q00535 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDK5Q00535 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.81□□□□□ -0.2
CDK5Q00535 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDK5Q00535 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDK5Q00535 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDK5Q00535 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDK5Q00535 CETN4P-206ENST00000642099 2168 ntBASIC13.81□□□□□ -0.2
CDK5Q00535 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDK5Q00535 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDK5Q00535 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDK5Q00535 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
CDK5Q00535 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDK5Q00535 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
CDK5Q00535 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.81□□□□□ -0.2
CDK5Q00535 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.81□□□□□ -0.2
CDK5Q00535 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.81□□□□□ -0.2
CDK5Q00535 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.81□□□□□ -0.2
CDK5Q00535 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.81□□□□□ -0.2
CDK5Q00535 AC005829.1-201ENST00000570002 483 ntBASIC13.81□□□□□ -0.2
CDK5Q00535 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
CDK5Q00535 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.81□□□□□ -0.2
CDK5Q00535 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDK5Q00535 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
CDK5Q00535 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDK5Q00535 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDK5Q00535 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDK5Q00535 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDK5Q00535 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDK5Q00535 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDK5Q00535 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDK5Q00535 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDK5Q00535 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDK5Q00535 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.81□□□□□ -0.2
CDK5Q00535 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDK5Q00535 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.81□□□□□ -0.2
CDK5Q00535 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.81□□□□□ -0.2
CDK5Q00535 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDK5Q00535 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.81□□□□□ -0.2
CDK5Q00535 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDK5Q00535 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDK5Q00535 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CDK5Q00535 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.81□□□□□ -0.2
CDK5Q00535 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDK5Q00535 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CDK5Q00535 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDK5Q00535 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDK5Q00535 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.8□□□□□ -0.2
CDK5Q00535 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDK5Q00535 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDK5Q00535 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
CDK5Q00535 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.8□□□□□ -0.2
CDK5Q00535 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CDK5Q00535 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CDK5Q00535 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDK5Q00535 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.8□□□□□ -0.2
CDK5Q00535 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDK5Q00535 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
CDK5Q00535 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CDK5Q00535 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDK5Q00535 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDK5Q00535 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDK5Q00535 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.8□□□□□ -0.2
CDK5Q00535 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.8□□□□□ -0.2
CDK5Q00535 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.8□□□□□ -0.2
CDK5Q00535 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.8□□□□□ -0.2
CDK5Q00535 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.8□□□□□ -0.2
CDK5Q00535 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.8□□□□□ -0.2
CDK5Q00535 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.8□□□□□ -0.2
CDK5Q00535 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDK5Q00535 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.8□□□□□ -0.2
CDK5Q00535 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.8□□□□□ -0.2
CDK5Q00535 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CDK5Q00535 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.8□□□□□ -0.2
CDK5Q00535 AL359881.3-201ENST00000602640 1721 ntBASIC13.8□□□□□ -0.2
CDK5Q00535 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDK5Q00535 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.8□□□□□ -0.2
CDK5Q00535 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.8□□□□□ -0.2
CDK5Q00535 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDK5Q00535 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDK5Q00535 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDK5Q00535 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDK5Q00535 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDK5Q00535 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDK5Q00535 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.8□□□□□ -0.2
CDK5Q00535 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CDK5Q00535 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.8□□□□□ -0.2
CDK5Q00535 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
CDK5Q00535 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms