Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCKAP1LP55160 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCKAP1LP55160 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCKAP1LP55160 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.69■□□□□ 0.26
NCKAP1LP55160 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.69■□□□□ 0.26
NCKAP1LP55160 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NCKAP1LP55160 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCKAP1LP55160 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCKAP1LP55160 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.68■□□□□ 0.26
NCKAP1LP55160 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.68■□□□□ 0.26
NCKAP1LP55160 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.68■□□□□ 0.26
NCKAP1LP55160 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.68■□□□□ 0.26
NCKAP1LP55160 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.68■□□□□ 0.26
NCKAP1LP55160 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NCKAP1LP55160 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.68■□□□□ 0.26
NCKAP1LP55160 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NCKAP1LP55160 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.68■□□□□ 0.26
NCKAP1LP55160 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCKAP1LP55160 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NCKAP1LP55160 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.68■□□□□ 0.26
NCKAP1LP55160 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCKAP1LP55160 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCKAP1LP55160 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCKAP1LP55160 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCKAP1LP55160 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCKAP1LP55160 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCKAP1LP55160 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.68■□□□□ 0.26
NCKAP1LP55160 AC112492.5-201ENST00000421897 457 ntBASIC16.68■□□□□ 0.26
NCKAP1LP55160 KRT43P-201ENST00000434019 910 ntBASIC16.68■□□□□ 0.26
NCKAP1LP55160 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.68■□□□□ 0.26
NCKAP1LP55160 CROCCP4-201ENST00000457096 498 ntBASIC16.68■□□□□ 0.26
NCKAP1LP55160 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.68■□□□□ 0.26
NCKAP1LP55160 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.68■□□□□ 0.26
NCKAP1LP55160 AC026434.2-201ENST00000506094 1078 ntBASIC16.68■□□□□ 0.26
NCKAP1LP55160 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NCKAP1LP55160 KRT17P8-201ENST00000540749 863 ntBASIC16.68■□□□□ 0.26
NCKAP1LP55160 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.68■□□□□ 0.26
NCKAP1LP55160 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NCKAP1LP55160 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.68■□□□□ 0.26
NCKAP1LP55160 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.68■□□□□ 0.26
NCKAP1LP55160 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.68■□□□□ 0.26
NCKAP1LP55160 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCKAP1LP55160 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCKAP1LP55160 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.68■□□□□ 0.26
NCKAP1LP55160 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCKAP1LP55160 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NCKAP1LP55160 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.67■□□□□ 0.26
NCKAP1LP55160 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NCKAP1LP55160 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NCKAP1LP55160 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKAP1LP55160 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.67■□□□□ 0.26
NCKAP1LP55160 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKAP1LP55160 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKAP1LP55160 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
NCKAP1LP55160 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NCKAP1LP55160 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKAP1LP55160 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKAP1LP55160 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
NCKAP1LP55160 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NCKAP1LP55160 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKAP1LP55160 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NCKAP1LP55160 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKAP1LP55160 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKAP1LP55160 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKAP1LP55160 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKAP1LP55160 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
NCKAP1LP55160 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKAP1LP55160 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKAP1LP55160 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.67■□□□□ 0.26
NCKAP1LP55160 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.67■□□□□ 0.26
NCKAP1LP55160 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.67■□□□□ 0.26
NCKAP1LP55160 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.67■□□□□ 0.26
NCKAP1LP55160 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NCKAP1LP55160 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKAP1LP55160 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.67■□□□□ 0.26
NCKAP1LP55160 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKAP1LP55160 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.67■□□□□ 0.26
NCKAP1LP55160 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
NCKAP1LP55160 RN7SL48P-201ENST00000579283 293 ntBASIC16.67■□□□□ 0.26
NCKAP1LP55160 AC239800.4-201ENST00000603712 296 ntBASIC16.67■□□□□ 0.26
NCKAP1LP55160 AC244669.2-201ENST00000612320 853 ntBASIC16.67■□□□□ 0.26
NCKAP1LP55160 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
NCKAP1LP55160 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.67■□□□□ 0.26
NCKAP1LP55160 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.67■□□□□ 0.26
NCKAP1LP55160 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.67■□□□□ 0.26
NCKAP1LP55160 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKAP1LP55160 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKAP1LP55160 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NCKAP1LP55160 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.67■□□□□ 0.26
NCKAP1LP55160 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NCKAP1LP55160 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKAP1LP55160 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKAP1LP55160 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
NCKAP1LP55160 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NCKAP1LP55160 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NCKAP1LP55160 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
NCKAP1LP55160 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NCKAP1LP55160 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NCKAP1LP55160 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NCKAP1LP55160 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms