Protein–RNA interactions for Protein: P50542

PEX5, Peroxisomal targeting signal 1 receptor, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX5P50542 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
PEX5P50542 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PEX5P50542 LINC02560-201ENST00000596379 459 ntBASIC16.08■□□□□ 0.16
PEX5P50542 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.08■□□□□ 0.16
PEX5P50542 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.08■□□□□ 0.16
PEX5P50542 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PEX5P50542 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PEX5P50542 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PEX5P50542 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PEX5P50542 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PEX5P50542 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PEX5P50542 AC097359.2-201ENST00000604992 2389 ntBASIC16.08■□□□□ 0.16
PEX5P50542 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PEX5P50542 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PEX5P50542 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PEX5P50542 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.08■□□□□ 0.16
PEX5P50542 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
PEX5P50542 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.08■□□□□ 0.16
PEX5P50542 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PEX5P50542 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PEX5P50542 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PEX5P50542 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PEX5P50542 AC113367.3-201ENST00000508316 1912 ntBASIC16.07■□□□□ 0.16
PEX5P50542 BX640514.1-201ENST00000583223 1918 ntBASIC16.07■□□□□ 0.16
PEX5P50542 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PEX5P50542 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PEX5P50542 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEX5P50542 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PEX5P50542 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.07■□□□□ 0.16
PEX5P50542 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEX5P50542 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PEX5P50542 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.07■□□□□ 0.16
PEX5P50542 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEX5P50542 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PEX5P50542 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PEX5P50542 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEX5P50542 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PEX5P50542 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEX5P50542 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PEX5P50542 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PEX5P50542 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.07■□□□□ 0.16
PEX5P50542 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEX5P50542 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PEX5P50542 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEX5P50542 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.07■□□□□ 0.16
PEX5P50542 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.07■□□□□ 0.16
PEX5P50542 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.07■□□□□ 0.16
PEX5P50542 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.07■□□□□ 0.16
PEX5P50542 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.07■□□□□ 0.16
PEX5P50542 AC190387.1-201ENST00000551683 408 ntBASIC16.07■□□□□ 0.16
PEX5P50542 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PEX5P50542 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.07■□□□□ 0.16
PEX5P50542 AC009118.2-201ENST00000613275 655 ntBASIC16.07■□□□□ 0.16
PEX5P50542 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PEX5P50542 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
PEX5P50542 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.07■□□□□ 0.16
PEX5P50542 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEX5P50542 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PEX5P50542 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.07■□□□□ 0.16
PEX5P50542 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEX5P50542 AC007787.1-201ENST00000588095 1583 ntBASIC16.07■□□□□ 0.16
PEX5P50542 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.07■□□□□ 0.16
PEX5P50542 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEX5P50542 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEX5P50542 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEX5P50542 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEX5P50542 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PEX5P50542 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.07■□□□□ 0.16
PEX5P50542 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEX5P50542 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PEX5P50542 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEX5P50542 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.06■□□□□ 0.16
PEX5P50542 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEX5P50542 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEX5P50542 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PEX5P50542 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PEX5P50542 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEX5P50542 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.06■□□□□ 0.16
PEX5P50542 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEX5P50542 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PEX5P50542 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEX5P50542 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEX5P50542 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PEX5P50542 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEX5P50542 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PEX5P50542 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PEX5P50542 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEX5P50542 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEX5P50542 MRPS18AP1-201ENST00000414458 589 ntBASIC16.06■□□□□ 0.16
PEX5P50542 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.06■□□□□ 0.16
PEX5P50542 AC009477.1-201ENST00000452936 217 ntBASIC16.06■□□□□ 0.16
PEX5P50542 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.06■□□□□ 0.16
PEX5P50542 RN7SL618P-201ENST00000477850 296 ntBASIC16.06■□□□□ 0.16
PEX5P50542 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PEX5P50542 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.06■□□□□ 0.16
PEX5P50542 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PEX5P50542 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.06■□□□□ 0.16
PEX5P50542 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.06■□□□□ 0.16
PEX5P50542 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
PEX5P50542 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms