Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.62■□□□□ 0.57
PDE6BP35913 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6BP35913 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6BP35913 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6BP35913 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6BP35913 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC18.62■□□□□ 0.57
PDE6BP35913 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6BP35913 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC18.62■□□□□ 0.57
PDE6BP35913 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC18.62■□□□□ 0.57
PDE6BP35913 PFN2-206ENST00000461930 606 ntTSL 4 BASIC18.62■□□□□ 0.57
PDE6BP35913 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC18.62■□□□□ 0.57
PDE6BP35913 SCARNA21-201ENST00000517026 139 ntBASIC18.62■□□□□ 0.57
PDE6BP35913 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6BP35913 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC18.62■□□□□ 0.57
PDE6BP35913 STUB1-204ENST00000564370 875 ntTSL 2 BASIC18.62■□□□□ 0.57
PDE6BP35913 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6BP35913 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC18.62■□□□□ 0.57
PDE6BP35913 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC18.62■□□□□ 0.57
PDE6BP35913 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
PDE6BP35913 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6BP35913 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6BP35913 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC18.62■□□□□ 0.57
PDE6BP35913 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6BP35913 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6BP35913 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.62■□□□□ 0.57
PDE6BP35913 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6BP35913 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6BP35913 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6BP35913 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6BP35913 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6BP35913 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDE6BP35913 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6BP35913 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PDE6BP35913 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6BP35913 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6BP35913 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6BP35913 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PDE6BP35913 AC006058.4-201ENST00000624016 1670 ntBASIC18.61■□□□□ 0.57
PDE6BP35913 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6BP35913 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6BP35913 FAM90A2P-201ENST00000511144 1395 ntBASIC18.61■□□□□ 0.57
PDE6BP35913 FAM90A25P-201ENST00000528404 1395 ntBASIC18.61■□□□□ 0.57
PDE6BP35913 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6BP35913 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6BP35913 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC18.61■□□□□ 0.57
PDE6BP35913 RPL7P35-201ENST00000446943 740 ntBASIC18.61■□□□□ 0.57
PDE6BP35913 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6BP35913 WT1-AS_6.1-201ENST00000614919 121 ntBASIC18.61■□□□□ 0.57
PDE6BP35913 AP001065.2-201ENST00000617205 644 ntBASIC18.61■□□□□ 0.57
PDE6BP35913 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC18.61■□□□□ 0.57
PDE6BP35913 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC18.61■□□□□ 0.57
PDE6BP35913 RPL35-206ENST00000629845 340 ntTSL 5 BASIC18.61■□□□□ 0.57
PDE6BP35913 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PDE6BP35913 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6BP35913 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6BP35913 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6BP35913 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PDE6BP35913 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6BP35913 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6BP35913 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.61■□□□□ 0.57
PDE6BP35913 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6BP35913 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6BP35913 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDE6BP35913 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.61■□□□□ 0.57
PDE6BP35913 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.61■□□□□ 0.57
PDE6BP35913 AL137783.1-201ENST00000623494 1896 ntBASIC18.6■□□□□ 0.57
PDE6BP35913 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6BP35913 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.6■□□□□ 0.57
PDE6BP35913 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PDE6BP35913 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.6■□□□□ 0.57
PDE6BP35913 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PDE6BP35913 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PDE6BP35913 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6BP35913 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6BP35913 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6BP35913 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6BP35913 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6BP35913 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6BP35913 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6BP35913 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC18.6■□□□□ 0.57
PDE6BP35913 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PDE6BP35913 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6BP35913 AC074138.1-201ENST00000611182 1303 ntBASIC18.6■□□□□ 0.57
PDE6BP35913 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6BP35913 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6BP35913 RN7SKP230-201ENST00000365642 335 ntBASIC18.6■□□□□ 0.57
PDE6BP35913 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PDE6BP35913 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC18.6■□□□□ 0.57
PDE6BP35913 HPGD-203ENST00000422112 805 ntTSL 2 BASIC18.6■□□□□ 0.57
PDE6BP35913 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDE6BP35913 AC078875.1-201ENST00000431907 724 ntBASIC18.6■□□□□ 0.57
PDE6BP35913 RN7SL67P-201ENST00000492147 296 ntBASIC18.6■□□□□ 0.57
PDE6BP35913 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.6■□□□□ 0.57
PDE6BP35913 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PDE6BP35913 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC18.6■□□□□ 0.57
PDE6BP35913 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC18.6■□□□□ 0.57
PDE6BP35913 AC026803.1-201ENST00000569130 274 ntBASIC18.6■□□□□ 0.57
PDE6BP35913 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.6■□□□□ 0.57
PDE6BP35913 Z98259.2-201ENST00000641583 609 ntBASIC18.6■□□□□ 0.57
PDE6BP35913 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms