Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.28■□□□□ 0.04
HTR1BP28222 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1BP28222 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1BP28222 TCAF2P1-201ENST00000291129 2421 ntBASIC15.28■□□□□ 0.04
HTR1BP28222 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.28■□□□□ 0.04
HTR1BP28222 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.28■□□□□ 0.04
HTR1BP28222 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1BP28222 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.28■□□□□ 0.04
HTR1BP28222 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1BP28222 AC138035.3-201ENST00000622706 2791 ntBASIC15.28■□□□□ 0.04
HTR1BP28222 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1BP28222 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HTR1BP28222 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.28■□□□□ 0.04
HTR1BP28222 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.28■□□□□ 0.04
HTR1BP28222 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1BP28222 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1BP28222 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.28■□□□□ 0.04
HTR1BP28222 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HTR1BP28222 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HTR1BP28222 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR1BP28222 NORAD-201ENST00000565493 5339 ntBASIC15.27■□□□□ 0.04
HTR1BP28222 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR1BP28222 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
HTR1BP28222 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HTR1BP28222 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR1BP28222 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HTR1BP28222 CICP13-201ENST00000422015 2789 ntBASIC15.27■□□□□ 0.04
HTR1BP28222 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.27■□□□□ 0.04
HTR1BP28222 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR1BP28222 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR1BP28222 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
HTR1BP28222 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR1BP28222 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.27■□□□□ 0.04
HTR1BP28222 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR1BP28222 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HTR1BP28222 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.27■□□□□ 0.04
HTR1BP28222 NUS1P3-201ENST00000423502 862 ntBASIC15.27■□□□□ 0.04
HTR1BP28222 AC007551.1-201ENST00000457394 519 ntBASIC15.27■□□□□ 0.04
HTR1BP28222 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.27■□□□□ 0.04
HTR1BP28222 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.27■□□□□ 0.04
HTR1BP28222 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.27■□□□□ 0.04
HTR1BP28222 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.27■□□□□ 0.03
HTR1BP28222 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.27■□□□□ 0.03
HTR1BP28222 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.27■□□□□ 0.03
HTR1BP28222 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.27■□□□□ 0.03
HTR1BP28222 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HTR1BP28222 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.27■□□□□ 0.03
HTR1BP28222 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
HTR1BP28222 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HTR1BP28222 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HTR1BP28222 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HTR1BP28222 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HTR1BP28222 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
HTR1BP28222 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HTR1BP28222 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
HTR1BP28222 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HTR1BP28222 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
HTR1BP28222 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.26■□□□□ 0.03
HTR1BP28222 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HTR1BP28222 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR1BP28222 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.26■□□□□ 0.03
HTR1BP28222 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR1BP28222 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR1BP28222 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR1BP28222 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR1BP28222 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.26■□□□□ 0.03
HTR1BP28222 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR1BP28222 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.26■□□□□ 0.03
HTR1BP28222 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.26■□□□□ 0.03
HTR1BP28222 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HTR1BP28222 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HTR1BP28222 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
HTR1BP28222 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR1BP28222 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR1BP28222 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HTR1BP28222 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HTR1BP28222 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.26■□□□□ 0.03
HTR1BP28222 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
HTR1BP28222 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.26■□□□□ 0.03
HTR1BP28222 AC092933.1-201ENST00000393644 945 ntBASIC15.26■□□□□ 0.03
HTR1BP28222 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.26■□□□□ 0.03
HTR1BP28222 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.26■□□□□ 0.03
HTR1BP28222 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.26■□□□□ 0.03
HTR1BP28222 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HTR1BP28222 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.26■□□□□ 0.03
HTR1BP28222 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.26■□□□□ 0.03
HTR1BP28222 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.26■□□□□ 0.03
HTR1BP28222 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.26■□□□□ 0.03
HTR1BP28222 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.26■□□□□ 0.03
HTR1BP28222 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.26■□□□□ 0.03
HTR1BP28222 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HTR1BP28222 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.26■□□□□ 0.03
HTR1BP28222 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.26■□□□□ 0.03
HTR1BP28222 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.26■□□□□ 0.03
HTR1BP28222 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.26■□□□□ 0.03
HTR1BP28222 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.26■□□□□ 0.03
HTR1BP28222 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR1BP28222 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HTR1BP28222 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR1BP28222 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms